Cell line name |
J.gamma1 |
Synonyms |
Jgamma1; Jurkat Gamma1 |
Accession |
CVCL_6410 |
Resource Identification Initiative |
To cite this cell line use: J.gamma1 (RRID:CVCL_6410) |
Comments |
Population: Caucasian. Transformant: ChEBI; CHEBI:132982; Acridine half-mustard dihydrochloride (6-chloro-9-[3-(2-chloroethylamino)propylamino]-2-methoxyacridine dihydrochloride; Acridine mutagen ICR 191). Omics: Deep phosphoproteome analysis. Omics: SNP array analysis. Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178. Cell type: T-cell; CL=CL_0000084. |
Sequence variations |
- Mutation; HGNC; 959; BAX; Simple; p.Glu41Argfs*19 (c.121delG); ClinVar=VCV000009512; Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 959; BAX; Simple; p.Glu41Glyfs*33 (c.121dupG); ClinVar=VCV000009511; Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 16712; FBXW7; Simple; p.Arg505Cys (c.1513C>T); ClinVar=VCV000069961; Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 6079; INPP5D; Simple; p.Gln345Ter (c.1033C>T); Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 6079; INPP5D; Simple; c.1097+1065_1097+1112del47; Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 7325; MSH2; Simple; p.Arg711Ter (c.2131C>T); ClinVar=VCV000090903; Zygosity=Homozygous (from parent cell line).
- Mutation; HGNC; 7329; MSH6; Simple; p.Phe1088Serfs*2 (c.3261delC); ClinVar=VCV000089363; Zygosity=Homozygous (from parent cell line).
- Mutation; HGNC; 11491; SYK; Simple; p.Met34Hisfs*3 (c.98_99insG); Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 11998; TP53; Simple; p.Arg196Ter (c.586C>T); ClinVar=VCV000043589; Zygosity=Heterozygous (from parent cell line).
|
Disease |
Childhood T acute lymphoblastic leukemia (NCIt: C7953) Precursor T-cell acute lymphoblastic leukemia (ORDO: Orphanet_99861) |
Species of origin |
Homo sapiens (Human)
(NCBI Taxonomy: 9606) |
Hierarchy |
Parent: CVCL_0367 (Jurkat E6.1) Children:
|
Sex of cell |
Male |
Age at sampling |
14Y |
Category |
Cancer cell line |
STR profile |
Source(s): ATCC=CRL-2678
Markers:Amelogenin | X |
CSF1PO | 11,12 |
D2S1338 | 18,23 |
D3S1358 | 15,17 |
D5S818 | 9 |
D7S820 | 8,12 |
D8S1179 | 13,14 |
D13S317 | 8,12 |
D16S539 | 11 |
D18S51 | 13,20 |
D19S433 | 14,15.2 |
D21S11 | 31.2,35.2 |
FGA | 20,21 |
Penta D | 10,13 |
Penta E | 10,12 |
TH01 | 6,9.3 |
TPOX | 8,10 |
vWA | 18,19 |
Run an STR similarity search on this cell line |
Publications | PubMed=11094067; DOI=10.1128/mcb.20.24.9149-9161.2000; PMCID=PMC102173 Irvin B.J., Williams B.L., Nilson A.E., Maynor H.O., Abraham R.T. Pleiotropic contributions of phospholipase C-gamma1 (PLC-gamma1) to T-cell antigen receptor-mediated signaling: reconstitution studies of a PLC-gamma1-deficient Jurkat T-cell line. Mol. Cell. Biol. 20:9149-9161(2000) PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458; PMCID=PMC2881662 Rothenberg S.M., Mohapatra G., Rivera M.N., Winokur D., Greninger P., Nitta M., Sadow P.M., Sooriyakumar G., Brannigan B.W., Ulman M.J., Perera R.M., Wang R., Tam A., Ma X.-J., Erlander M., Sgroi D.C., Rocco J.W., Lingen M.W., Cohen E.E.W., Louis D.N., Settleman J., Haber D.A. A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers. Cancer Res. 70:2158-2164(2010) PubMed=26546556; DOI=10.1016/j.jprot.2015.10.029 Nguyen T.D., Carrascal M., Vidal-Cortes O., Gallardo O., Casas V., Gay M., Phan V.C., Abian J. The phosphoproteome of human Jurkat T cell clones upon costimulation with anti-CD3/anti-CD28 antibodies. J. Proteomics 131:190-198(2016) |
Cross-references |
Cell line collections (Providers) |
ATCC; CRL-2678
|
Cell line databases/resources |
CLO; CLO_0006985
CLO; CLO_0009836
cancercelllines; CVCL_6410
LINCS_LDP; LCL-2038
|
Biological sample resources |
BioSample; SAMN03471763
|
Encyclopedic resources |
Wikidata; Q54898430
|
Gene expression databases |
GEO; GSM827148
|
Polymorphism and mutation databases |
Progenetix; CVCL_6410
|
Proteomic databases |
PRIDE; PXD002871
|
Entry history |
Entry creation | 04-Apr-2012 |
Last entry update | 02-May-2024 |
Version number | 30 |
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