Cellosaurus SK-N-BE(2)-C (CVCL_0529)
Cell line name | SK-N-BE(2)-C | ||||||||||||||||||||||||||||||||||||
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Synonyms | SK-N-BE(2)C; SK-N-BE-2c; SK-N-BE2(c); SK-N-BE(2C); SK-N-BE(2c); SK-N-BE2C; SK_N_BE2C; SKNBE2C; SKNBE(2c); BE(2)-C; BE(2)C; Be(2)C; BE2-C; BE2_C; Be2-C; BE2C; Be2C | ||||||||||||||||||||||||||||||||||||
Accession | CVCL_0529 | ||||||||||||||||||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: SK-N-BE(2)-C (RRID:CVCL_0529) | ||||||||||||||||||||||||||||||||||||
Comments | Part of: ENCODE project common cell types; tier 3. From: Memorial Sloan Kettering Cancer Center; New York; USA. Registration: Memorial Sloan Kettering Cancer Center Office of Technology Development; SK1980-532. Population: Caucasian. Characteristics: Intermediate type (I-type) (PubMed=15720811). Characteristics: MYCN-amplified NBL cell line. Doubling time: ~18 hours (ATCC=CRL-2268). Omics: Array-based CGH. Omics: Chromatin accessibility by ATAC-seq. Omics: CTCF ChIP-seq epigenome analysis. Omics: H3K27ac ChIP-seq epigenome analysis. Omics: H3K27me3 ChIP-seq epigenome analysis. Omics: H3K4me1 ChIP-seq epigenome analysis. Omics: H3K4me3 ChIP-seq epigenome analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Omics: Transcriptome analysis by single cell RNAseq. Derived from site: Metastatic; Bone marrow; UBERON=UBERON_0002371. | ||||||||||||||||||||||||||||||||||||
Sequence variations |
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Disease | Neuroblastoma (NCIt: C3270) Neuroblastoma (ORDO: Orphanet_635) | ||||||||||||||||||||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||||||||||||||||||
Hierarchy | Parent: CVCL_0528 (SK-N-BE(2)) Children:
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Sex of cell | Male | ||||||||||||||||||||||||||||||||||||
Age at sampling | 2Y2M | ||||||||||||||||||||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||||||||||||||||||||
STR profile | Source(s): ATCC=CRL-2268; ECACC=95011817 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||||||||||||||||||||
Web pages | http://genome.ucsc.edu/ENCODE/protocols/cell/human/BE2-C_Myers_protocol.pdf https://www.thermofisher.com/ch/en/home/technical-resources/cell-lines/b/cell-lines-detail-162.html https://www.mskcc.org/research-advantage/support/technology/tangible-material/sk-n-be-2-c-human-neuroblastoma-cell-line | ||||||||||||||||||||||||||||||||||||
Publications | PubMed=6582512; DOI=10.1073/pnas.81.2.568; PMCID=PMC344720 PubMed=2535691 PubMed=1985865; DOI=10.1002/ijc.2910470119 PubMed=8665486; DOI=10.1016/0304-3835(96)04250-4 PubMed=10630978; DOI=10.1667/0033-7587(2000)153[0062:FORIMI]2.0.CO;2 PubMed=11196202 PubMed=15150552; DOI=10.1038/sj.bjc.6601842; PMCID=PMC2409504 PubMed=15390183; DOI=10.1002/gcc.20096 PubMed=15720811; DOI=10.1593/neo.04310; PMCID=PMC1531688 PubMed=15892104; DOI=10.1002/gcc.20198 PubMed=18724359; DOI=10.1038/nature07261; PMCID=PMC2672043 PubMed=19147553; DOI=10.1158/0008-5472.CAN-08-1856 PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458; PMCID=PMC2881662 PubMed=23202128; DOI=10.1038/ng.2493; PMCID=PMC3557959 PubMed=23325432; DOI=10.1101/gr.147942.112; PMCID=PMC3589544 PubMed=24466371; DOI=10.1593/tlo.13544; PMCID=PMC3890703 PubMed=26342562; DOI=10.1016/j.scr.2015.08.008; PMCID=PMC4601571 PubMed=28350380; DOI=10.1038/sdata.2017.33; PMCID=PMC5369315 PubMed=33525507; DOI=10.3390/biom11020177; PMCID=PMC7912277 | ||||||||||||||||||||||||||||||||||||
Cross-references | |||||||||||||||||||||||||||||||||||||
Cell line collections (Providers) | ATCC; CRL-2268
ECACC; 95011817 ICLC; HTL96018 NCBI_Iran; C577 | ||||||||||||||||||||||||||||||||||||
Cell line databases/resources | CLO; CLO_0001915
CLO; CLO_0009053 MCCL; MCC:0000428 CLDB; cl413 CLDB; cl4334 cancercelllines; CVCL_0529 Cell_Model_Passport; SIDM01232 IGRhCellID; BE2C LINCS_LDP; LCL-1963 | ||||||||||||||||||||||||||||||||||||
Anatomy/cell type resources | BTO; BTO:0004782 | ||||||||||||||||||||||||||||||||||||
Biological sample resources | BioSample; SAMN03471855
ENCODE; ENCBS271SFD ENCODE; ENCBS403ENC ENCODE; ENCBS427ENC ENCODE; ENCBS982TUR | ||||||||||||||||||||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL4482984
ChEMBL-Targets; CHEMBL4483229 PubChem_Cell_line; CVCL_0529 | ||||||||||||||||||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54954443 | ||||||||||||||||||||||||||||||||||||
Experimental variables resources | EFO; EFO_0005725 | ||||||||||||||||||||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-38
GEO; GSM651567 GEO; GSM651568 GEO; GSM945241 GEO; GSM945283 GEO; GSM923434 GEO; GSM1022648 GEO; GSM1022650 GEO; GSM1022653 GEO; GSM2371256 GEO; GSM2394383 GEO; GSM3145690 GEO; GSM4104593 GEO; GSM4104594 GEO; GSM4105343 GEO; GSM4105344 GEO; GSM4105345 GEO; GSM4105346 GEO; GSM4105347 | ||||||||||||||||||||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 688061
Cosmic; 922659 Cosmic; 1162003 Cosmic; 1167421 Cosmic; 1526648 IARC_TP53; 15544 Progenetix; CVCL_0529 | ||||||||||||||||||||||||||||||||||||
Proteomic databases | PRIDE; PXD003596 | ||||||||||||||||||||||||||||||||||||
Entry history | |||||||||||||||||||||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||||||||||||||||||||
Last entry update | 02-May-2024 | ||||||||||||||||||||||||||||||||||||
Version number | 38 |