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Cellosaurus 46C-Rybp KO (CVCL_YJ62)

[Text version]
Cell line name 46C-Rybp KO
Synonyms 46C-RYBP KO; GIBHe001-A-1
Accession CVCL_YJ62
Resource Identification Initiative To cite this cell line use: 46C-Rybp KO (RRID:CVCL_YJ62)
Comments Characteristics: Using CRISPR/Cas9 the last two exons of Rybp gene were replaced with a PGKp-PuroR construct (PubMed=31794887).
Characteristics: Using homologous recombination the Sox1 reading frame was replaced by a GFP-IRES-PuroR construct. Expresses eGFP under the control of the Sox-1 promoter (from parent cell line).
Knockout cell: Method=CRISPR/Cas9; MGI; MGI:1929059; Rybp.
Selected for resistance to: ChEBI; CHEBI_9555; Tioguanine (6-thioguanine; 6-TG).
Genetic integration: Method=CRISPR/Cas9; Gene=UniProtKB; P13249; S.alboniger pac (PuroR).
Genetic integration: Method=Homologous recombination; Gene=FPbase; R9NL8; eGFP (Note=Enhanced GFP).
Genetic integration: Method=Homologous recombination; Gene=UniProtKB; P13249; S.alboniger pac (PuroR).
Caution: Named GIBHe001-A-1 which according to ESC nomenclature rules would imply being a derivative of the GIBHe001-A human ESC cell line, but this is not the case.
Derived from site: In situ; Blastocyst; UBERON=UBERON_0000358.
Cell type: Embryonic stem cell; CL=CL_0002322.
Species of origin Mus musculus (Mouse) (NCBI Taxonomy: 10090)
Breed/subspecies: 129P2/Ola.
Hierarchy Parent: CVCL_Y482 (46C)
Sex of cell Male
Age at sampling Blastocyst stage
Category Embryonic stem cell
Publications

PubMed=31794887; DOI=10.1016/j.scr.2019.101638
Liu Z.-C., Yao M.-Z., Yao H.-J., Hu G.-C., Qin B.-M.
Generation of Rybp homozygous knockout murine ES cell line GIBHe001-A-1 by using CRISPR/Cas9 technology.
Stem Cell Res. 41:101638-101638(2019)

Cross-references
Cell line databases/resources SKIP; SKIP005593
Encyclopedic resources Wikidata; Q93307125
Entry history
Entry creation19-Dec-2019
Last entry update19-Dec-2024
Version number8