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Cellosaurus KOLF2.1J (CVCL_B5P3)

[Text version]
Cell line name KOLF2.1J
Synonyms KOLF 2.1J; WTSIi018-B-12; JAXi019-A-12; JIPSC001000; JIPSC1000
Accession CVCL_B5P3
Resource Identification Initiative To cite this cell line use: KOLF2.1J (RRID:CVCL_B5P3)
Comments From: The Jackson Laboratory; Bar Harbor; USA.
Population: Caucasian; British.
Omics: Genome sequenced.
Derived from site: In situ; Skin; UBERON=UBERON_0002097.
Cell type: Fibroblast of skin; CL=CL_0002620.
Sequence variations
  • Mutation; HGNC; HGNC:18037; ARID2; Simple_corrected; p.Pro197Hisfs*12 (c.590_608delCTAAAATCATCACTTTACT); Zygosity=Heterozygous; Note=By CRISPR/Cas9 (PubMed=36459969).
  • Mutation; HGNC; HGNC:2201; COL3A1; Simple; c.3526-1G>A; Zygosity=Heterozygous; Note=Splice acceptor mutation (from parent cell line).
  • Mutation; HGNC; HGNC:2201; COL3A1; Simple; p.Gly1176Ser (c.3526G>A); Zygosity=Heterozygous (from parent cell line).
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_9S58 (HPSI0114i-kolf_2-C1)
Children:
CVCL_D1J6 (KOLF2.1J AAVS1-TREG3-NGN2)CVCL_E4NI (KOLF2.1J ABCA7 24.2KBDEL DEL/DEL)CVCL_E4NK (KOLF2.1J ABCA7 E1679X SNV/SNV)
CVCL_E4NL (KOLF2.1J ABCA7 E1679X SNV/WT)CVCL_E4NN (KOLF2.1J ABCA7 W1214X SNV/SNV)CVCL_E4NP (KOLF2.1J ABCA7 W1214X SNV/WT)
CVCL_E4TR (KOLF2.1J ADAM10 PTC PTC/PTC)CVCL_E4NQ (KOLF2.1J ANXA11 17.0KBDEL DEL/DEL)CVCL_E4NS (KOLF2.1J ANXA11 D40G SNV/SNV)
CVCL_E4NT (KOLF2.1J ANXA11 D40G SNV/WT)CVCL_E4NV (KOLF2.1J ANXA11 G38R SNV/SNV)CVCL_E4NW (KOLF2.1J ANXA11 G38R SNV/WT)
CVCL_E4NY (KOLF2.1J ANXA11 R346C SNV/SNV)CVCL_E4NZ (KOLF2.1J ANXA11 R346C SNV/WT)CVCL_E4TS (KOLF2.1J APOE 2.6KBDEL DEL/DEL)
CVCL_E4TT (KOLF2.1J ATM 60.2KBDEL DEL/DEL)CVCL_E4TU (KOLF2.1J ATP13A2 18.4KBDEL DEL/DEL)CVCL_E4P0 (KOLF2.1J BCAT1 65.2KBDEL DEL/DEL)
CVCL_E4P1 (KOLF2.1J BLOC1S1 3.7KBDEL DEL/DEL)CVCL_E4TV (KOLF2.1J CACNA1A 164.6KBDEL DEL/WT)CVCL_E4TW (KOLF2.1J CACNA1A PTC PTC/PTC)
CVCL_E4TX (KOLF2.1J CACNA1G 58.1KBDEL DEL/DEL)CVCL_E4TY (KOLF2.1J CHCHD10 1.8KBDEL DEL/DEL)CVCL_E4TZ (KOLF2.1J CHMP2B 26.3KBDEL DEL/DEL)
CVCL_E4QP (KOLF2.1J CLN5 9.1KBDEL DEL/DEL)CVCL_E4QM (KOLF2.1J CLN5 W26X SNV/SNV)CVCL_E4QN (KOLF2.1J CLN5 W26X SNV/WT)
CVCL_E4QC (KOLF2.1J CNTNAP2 81.7KBDEL DEL/DEL)CVCL_E4U0 (KOLF2.1J COQ2 20.9KBDEL DEL/WT)CVCL_E4QD (KOLF2.1J CSF1R 27KBDEL DEL/DEL)
CVCL_E4PT (KOLF2.1J CSF1R A781E SNV/SNV)CVCL_E4PU (KOLF2.1J CSF1R A781E SNV/WT)CVCL_E4PW (KOLF2.1J CSF1R E633K SNV/SNV)
CVCL_E4PX (KOLF2.1J CSF1R E633K SNV/WT)CVCL_D6I7 (KOLF2.1J DJ1 L166P clone 1)CVCL_D6I8 (KOLF2.1J DJ1 L166P clone 2)
CVCL_E4QE (KOLF2.1J DNAJC6 48.8KBDEL DEL/DEL)CVCL_E4U1 (KOLF2.1J DNMT1 46.7KBDEL DEL/WT)CVCL_E4U2 (KOLF2.1J EIF2B1 12.3KBDEL DEL/WT)
CVCL_E4QF (KOLF2.1J EIF2B2 1.1KBDEL DEL/WT)CVCL_E4QG (KOLF2.1J EIF2B4 1.8KBDEL DEL/WT)CVCL_E4U3 (KOLF2.1J EIF2B5 9.7KBDEL DEL/WT)
CVCL_E4W9 (KOLF2.1J ERBB4 PTC PTC/PTC)CVCL_E4T3 (KOLF2.1J FBXO7 I87T SNV/SNV)CVCL_E4T4 (KOLF2.1J FBXO7 I87T SNV/WT)
CVCL_E4P3 (KOLF2.1J FUS P525L SNV/SNV)CVCL_E4P4 (KOLF2.1J FUS P525L SNV/WT)CVCL_E4P6 (KOLF2.1J FUS R216C SNV/SNV)
CVCL_E4P7 (KOLF2.1J FUS R216C SNV/WT)CVCL_E4P9 (KOLF2.1J FUS R495X SNV/SNV)CVCL_E4PA (KOLF2.1J FUS R495X SNV/WT)
CVCL_E4PC (KOLF2.1J FUS R521G SNV/SNV)CVCL_E4PD (KOLF2.1J FUS R521G SNV/WT)CVCL_E4PF (KOLF2.1J FUS R521H SNV/SNV)
CVCL_E4PG (KOLF2.1J FUS R521H SNV/WT)CVCL_E4PH (KOLF2.1J FXN 37.6KBDEL DEL/WT)CVCL_E4VU (KOLF2.1J GBA1 5.4KBDEL DEL/DEL)
CVCL_E4VW (KOLF2.1J GBA1 D448V SNV/SNV)CVCL_E4VX (KOLF2.1J GBA1 D448V SNV/WT)CVCL_E4VZ (KOLF2.1J GBA1 E326K SNV/SNV)
CVCL_E4W0 (KOLF2.1J GBA1 E326K SNV/WT)CVCL_E4T1 (KOLF2.1J GCH1 1.5KBDEL DEL/DEL)CVCL_E4SZ (KOLF2.1J GCH1 G201E SNV/SNV)
CVCL_E4T0 (KOLF2.1J GCH1 G201E SNV/WT)CVCL_E4YK (KOLF2.1J GRN 3.8KBDEL DEL/DEL)CVCL_E4QJ (KOLF2.1J GRN Q125X SNV/SNV)
CVCL_E4QK (KOLF2.1J GRN Q125X SNV/WT)CVCL_E4W1 (KOLF2.1J HNRNPA1 5.1KBDEL DEL/WT)CVCL_E4QB (KOLF2.1J HNRNPA2B1 8.1KBDEL DEL/WT)
CVCL_E4WA (KOLF2.1J KCNC3 8.9KBDEL DEL/DEL)CVCL_E4QA (KOLF2.1J KCND3 1.2KBDEL DEL/DEL)CVCL_E4WB (KOLF2.1J KCTD13 PTC PTC/WT)
CVCL_E4WC (KOLF2.1J KCTD13 PTC PTC/PTC)CVCL_E4WD (KOLF2.1J KIF5A 32.9KBDEL DEL/DEL)CVCL_E4WF (KOLF2.1J KIF5A N256S SNV/SNV)
CVCL_E4WG (KOLF2.1J KIF5A N256S SNV/WT)CVCL_E4T5 (KOLF2.1J LRRK2 142.6KBDEL DEL/DEL)CVCL_E4T7 (KOLF2.1J LRRK2 I2020T SNV/SNV)
CVCL_E4T8 (KOLF2.1J LRRK2 I2020T SNV/WT)CVCL_E4TA (KOLF2.1J LRRK2 N2081D SNV/SNV)CVCL_E4TB (KOLF2.1J LRRK2 N2081D SNV/WT)
CVCL_E4PJ (KOLF2.1J LRRK2 R1441C SNV/SNV)CVCL_E4PK (KOLF2.1J LRRK2 R1441C SNV/WT)CVCL_E4PM (KOLF2.1J LRRK2 R1441G SNV/SNV)
CVCL_E4PN (KOLF2.1J LRRK2 R1441G SNV/WT)CVCL_E4PQ (KOLF2.1J LRRK2 R1441H SNV/SNV)CVCL_E4PR (KOLF2.1J LRRK2 R1441H SNV/WT)
CVCL_E4TD (KOLF2.1J LRRK2 R793M SNV/SNV)CVCL_E4TE (KOLF2.1J LRRK2 R793M SNV/WT)CVCL_E4TG (KOLF2.1J LRRK2 Y1699C SNV/WT)
CVCL_E4U4 (KOLF2.1J MATR3 24.0KBDEL DEL/WT)CVCL_E4Q9 (KOLF2.1J MSMO1 15.9KBDEL DEL/WT)CVCL_E4Q8 (KOLF2.1J OPTN 27.8KBDEL DEL/DEL)
CVCL_E4Q7 (KOLF2.1J OTUD4 30.9KBDEL DEL/WT)CVCL_E4U5 (KOLF2.1J PAH 60.2KBDEL DEL/DEL)CVCL_E4U6 (KOLF2.1J PANK2 28.2KBDEL DEL/DEL)
CVCL_E4W7 (KOLF2.1J PANK2 C.1413-1G>T SNV/SNV)CVCL_E4W8 (KOLF2.1J PANK2 C.1413-1G>T SNV/WT)CVCL_E4TL (KOLF2.1J PARK7 D149A SNV/SNV)
CVCL_E4TM (KOLF2.1J PARK7 D149A SNV/WT)CVCL_E4TI (KOLF2.1J PARK7 L166P SNV/SNV)CVCL_E4TJ (KOLF2.1J PARK7 L166P SNV/WT)
CVCL_E4Q6 (KOLF2.1J PDE10A 71.8KBDEL DEL/DEL)CVCL_E4WI (KOLF2.1J PINK1 A217D SNV/SNV)CVCL_E4WJ (KOLF2.1J PINK1 A217D SNV/WT)
CVCL_E4WL (KOLF2.1J PINK1 P399L SNV/SNV)CVCL_E4WM (KOLF2.1J PINK1 P399L SNV/WT)CVCL_E4U7 (KOLF2.1J PLAAT4 9.8KBDEL DEL/DEL)
CVCL_E4VR (KOLF2.1J PLEKHG4 8.8KBDEL DEL/DEL)CVCL_E4VS (KOLF2.1J POLG 17.1KBDEL DEL/WT)CVCL_C7TY (KOLF2.1J PPM1H KO)
CVCL_E4Q5 (KOLF2.1J PRKAR1B 0.2KBDEL DEL/DEL)CVCL_E4VT (KOLF2.1J PRKCG 24.4KBDEL DEL/DEL)CVCL_E4UI (KOLF2.1J PRKN P437L SNV/SNV)
CVCL_E4UJ (KOLF2.1J PRKN P437L SNV/WT)CVCL_E4UL (KOLF2.1J PRKN R275W SNV/SNV)CVCL_E4UM (KOLF2.1J PRKN R275W SNV/WT)
CVCL_E4UP (KOLF2.1J PRKN R42P SNV/SNV)CVCL_E4UQ (KOLF2.1J PRKN R42P SNV/WT)CVCL_E4US (KOLF2.1J PRKN T240M SNV/SNV)
CVCL_E4UT (KOLF2.1J PRKN T240M SNV/WT)CVCL_E4UU (KOLF2.1J PRNP 0.9KBDEL DEL/DEL)CVCL_E4Q4 (KOLF2.1J PSAT1 32.4KBDEL DEL/DEL)
CVCL_E4ST (KOLF2.1J PSEN1 E276A SNV/SNV)CVCL_E4SU (KOLF2.1J PSEN1 E276A SNV/WT)CVCL_E4SW (KOLF2.1J PSEN1 M146I SNV/SNV)
CVCL_E4SX (KOLF2.1J PSEN1 M146I SNV/WT)CVCL_E4SR (KOLF2.1J PSEN2 13.7KBDEL DEL/DEL)CVCL_E4SP (KOLF2.1J PSEN2 M239I SNV/SNV)
CVCL_E4SQ (KOLF2.1J PSEN2 M239I SNV/WT)CVCL_E4SL (KOLF2.1J PSEN2 N141I SNV/SNV)CVCL_E4SM (KOLF2.1J PSEN2 N141I SNV/WT)
CVCL_E5EF (KOLF2.1J RAB39B T168K SNV/Y)CVCL_E4Q3 (KOLF2.1J RANBP1 7.5KBDEL DEL/DEL)CVCL_E4UV (KOLF2.1J RNF216 70.9KBDEL DEL/DEL)
CVCL_E4UX (KOLF2.1J RNF216 R694C SNV/SNV)CVCL_E4UY (KOLF2.1J RNF216 R694C SNV/WT)CVCL_E4Q2 (KOLF2.1J SCN2A 94.3KBDEL DEL/DEL)
CVCL_E4VD (KOLF2.1J SERPINI1 4.6KBDEL DEL/DEL)CVCL_E4Q1 (KOLF2.1J SEZ6L2 28.6KBDEL DEL/DEL)CVCL_E4VA (KOLF2.1J SIGMAR1 2.1KBDEL DEL/DEL)
CVCL_E4VB (KOLF2.1J SLC1A3 15.4KBDEL DEL/DEL)CVCL_E4VC (KOLF2.1J SNCA 6.2KBDEL DEL/DEL)CVCL_E4VF (KOLF2.1J SNCA A30G SNV/SNV)
CVCL_E4VG (KOLF2.1J SNCA A30G SNV/WT)CVCL_E4VI (KOLF2.1J SNCA A30P SNV/SNV)CVCL_E4VJ (KOLF2.1J SNCA A30P SNV/WT)
CVCL_E4VL (KOLF2.1J SNCA A53T SNV/SNV)CVCL_E4VM (KOLF2.1J SNCA A53T SNV/WT)CVCL_E4VP (KOLF2.1J SNCA E46K SNV/SNV)
CVCL_E4VQ (KOLF2.1J SNCA E46K SNV/WT)CVCL_E4U8 (KOLF2.1J SOD1 9.2KBDEL DEL/WT)CVCL_E4UA (KOLF2.1J SOD1 A5V SNV/SNV)
CVCL_E4UB (KOLF2.1J SOD1 A5V SNV/WT)CVCL_E4UD (KOLF2.1J SOD1 D91A SNV/SNV)CVCL_E4UE (KOLF2.1J SOD1 D91A SNV/WT)
CVCL_E4UG (KOLF2.1J SOD1 I113T SNV/WT)CVCL_E4W2 (KOLF2.1J SPG11 PTC PTC/PTC)CVCL_E4W4 (KOLF2.1J SPG11 Q1875X SNV/SNV)
CVCL_E4W5 (KOLF2.1J SPG11 Q1875X SNV/WT)CVCL_E4UZ (KOLF2.1J SYNJ1 71.0KBDEL DEL/DEL)CVCL_E4SJ (KOLF2.1J TARDBP 10.6KBDEL DEL/WT)
CVCL_E4SE (KOLF2.1J TARDBP M337V SNV/SNV)CVCL_E4SF (KOLF2.1J TARDBP M337V SNV/WT)CVCL_E4SH (KOLF2.1J TARDBP Q331K SNV/SNV)
CVCL_E4SI (KOLF2.1J TARDBP Q331K SNV/WT)CVCL_E4V0 (KOLF2.1J TBK1 41KBDEL DEL/DEL)CVCL_C8FQ (KOLF2.1J TH-TdTomato)
CVCL_E4TN (KOLF2.1J TIA1 22.2KBDEL DEL/DEL)CVCL_E4Q0 (KOLF2.1J TMEM106B 17.7KBDEL DEL/DEL)CVCL_E4TP (KOLF2.1J TREM2 3.0KBDEL DEL/DEL)
CVCL_E4V2 (KOLF2.1J TREM2 E151K SNV/SNV)CVCL_E4V3 (KOLF2.1J TREM2 E151K SNV/WT)CVCL_E4V5 (KOLF2.1J TREM2 R62H SNV/SNV)
CVCL_E4V6 (KOLF2.1J TREM2 R62H SNV/WT)CVCL_E4V8 (KOLF2.1J TREM2 T66M SNV/SNV)CVCL_E4V9 (KOLF2.1J TREM2 T66M SNV/WT)
CVCL_E4QW (KOLF2.1J VCP 11.4KBDEL DEL/WT)CVCL_E4QR (KOLF2.1J VCP R155C SNV/SNV)CVCL_E4QS (KOLF2.1J VCP R155C SNV/WT)
CVCL_E4QU (KOLF2.1J VCP R159H SNV/SNV)CVCL_E4QV (KOLF2.1J VCP R159H SNV/WT)CVCL_E4PY (KOLF2.1J VIPR2 72.1KBDEL DEL/DEL)
CVCL_E4TQ (KOLF2.1J VPS13C 103.8KBDEL DEL/DEL)CVCL_E4PZ (KOLF2.1J VPS13D 157.2KBDEL DEL/WT)CVCL_D6RH (WTSIi018-B-19)
CVCL_D6RI (WTSIi018-B-20)
Sex of cell Male
Age at sampling 55-59Y
Category Induced pluripotent stem cell
STR profile Source(s): PubMed=38518401

Markers:
AmelogeninX,Y
CSF1PO11,12
D1S165614,18.3
D2S133817,19
D3S135816
D5S81812,13
D6S104312,20
D7S8209,11
D8S117911,14
D12S39118,22
D13S3179,10
D16S5399,13
D18S5112,17
D19S43314,15
D21S1131,32.2
FGA21
Penta D12,15
Penta E10,12
TH016,9.3
TPOX8,11
vWA14

Run an STR similarity search on this cell line
Web pages https://www.jax.org/jax-mice-and-services/ipsc/cells-collection/JIPSC001000
Publications

PubMed=36459969; DOI=10.1016/j.stem.2022.11.004; PMCID=PMC9782786
Pantazis C.B., Yang A., Lara E., McDonough J.A., Blauwendraat C., Peng L.-R., Oguro H., Kanaujiya J., Zou J.-Z., Sebesta D., Pratt G., Cross E., Blockwick J., Buxton P., Kinner-Bibeau L.B., Medura C., Tompkins C., Hughes S., Santiana M., Faghri F., Nalls M.A., Vitale D., Ballard S., Qi Y.A., Ramos D.M., Anderson K.M., Stadler J., Narayan P., Papademetriou J., Reilly L., Nelson M.P., Aggarwal S., Rosen L.U., Kirwan P., Pisupati V., Coon S.L., Scholz S.W., Priebe T., Ottl M., Dong J., Meijer M., Janssen L.J.M., Lourenco V.S., van der Kant R., Crusius D., Paquet D., Raulin A.-C., Bu G.-J., Held A., Wainger B.J., Gabriele R.M.C., Casey J.M., Wray S., Abu-Bonsrah K.D., Parish C.L., Beccari M.S., Cleveland D.W., Li E., Rose I.V.L., Kampmann M., Calatayud Aristoy C., Verstreken P., Heinrich L., Chen M.Y., Schule B., Dou D., Holzbaur E.L.F., Zanellati M.C., Basundra R., Deshmukh M., Cohen S., Khanna R., Raman M., Nevin Z.S., Matia M., Van Lent J., Timmerman V., Conklin B.R., Chase K.J., Zhang K., Funes S., Bosco D.A., Erlebach L., Welzer M., Kronenberg-Versteeg D., Lyu G.-C., Arenas E., Coccia E., Sarrafha L., Ahfeldt T., Marioni J.C., Skarnes W.C., Cookson M.R., Ward M.E., Merkle F.T.
A reference human induced pluripotent stem cell line for large-scale collaborative studies.
Cell Stem Cell 29:1685-1702.e22(2022)

PubMed=38518401; DOI=10.1016/j.scr.2024.103395
Binder S., Ramachandran H., Haslinger D., Hildebrandt B., Dobner J., Haarmann-Stemmann T., Chiocchetti A.G., Rossi A.
CRISPR/Cas9-mediated editing of ACTB in induced pluripotent stem cells: a model for investigating human ACTB loss-of-function and genetic adaptive responses.
Stem Cell Res. 77:103395-103395(2024)

Cross-references
Cell line databases/resources hPSCreg; WTSIi018-B-12
Encyclopedic resources Wikidata; Q117704576
Entry history
Entry creation21-Mar-2023
Last entry update19-Dec-2024
Version number5