Cellosaurus GIST-T1 (CVCL_4976)
Cell line name | GIST-T1 | |||||||||
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Synonyms | GIST-T-1; GISTT1; T1 | |||||||||
Accession | CVCL_4976 | |||||||||
Resource Identification Initiative | To cite this cell line use: GIST-T1 (RRID:CVCL_4976) | |||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Population: Japanese. Doubling time: 48 hours (PubMed=12004007). Omics: Chromatin accessibility by ATAC-seq. Omics: Deep exome analysis. Omics: Deep tyrosine phosphoproteome analysis. Omics: H3K27ac ChIP-seq epigenome analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: Metastatic; Pleural effusion; UBERON=UBERON_0000175. Cell type: Interstitial cell of Cajal; CL=CL_0002088. | |||||||||
Sequence variations | ||||||||||
Disease | Gastrointestinal stromal tumor (NCIt: C3868) Gastrointestinal stromal tumor (ORDO: Orphanet_44890) | |||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | |||||||||
Hierarchy | Children:
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Sex of cell | Female | |||||||||
Age at sampling | 47Y | |||||||||
Category | Cancer cell line | |||||||||
Web pages | https://www.cosmobio.com/contents/gist-t1_culture_kit.html | |||||||||
Publications | PubMed=12004007; DOI=10.1038/labinvest.3780461 PubMed=16077968; DOI=10.3892/or.14.3.645 PubMed=19706776; DOI=10.1158/0008-5472.CAN-08-4004; PMCID=PMC2905726 PubMed=22665524; DOI=10.1158/1535-7163.MCT-12-0223; PMCID=PMC3992122 PubMed=23716303; DOI=10.1002/ijc.28282 PubMed=25239608; DOI=10.1158/1078-0432.CCR-14-1397; PMCID=PMC4233175 PubMed=27997714; DOI=10.1002/gcc.22438; PMCID=PMC5324566 PubMed=29866822; DOI=10.1073/pnas.1802079115; PMCID=PMC6016782 PubMed=32736695; DOI=10.1016/j.bbrc.2020.05.174 PubMed=34738628; DOI=10.3892/or.2021.8218; PMCID=PMC8600406 | |||||||||
Cross-references | ||||||||||
Cell line databases/resources | DepMap; ACH-002332 | |||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL4482986
ChEMBL-Targets; CHEMBL4483238 PubChem_Cell_line; CVCL_4976 | |||||||||
Encyclopedic resources | Wikidata; Q54835846 | |||||||||
Gene expression databases | GEO; GSM1701539
GEO; GSM2527248 GEO; GSM2527250 GEO; GSM2527251 GEO; GSM2527316 GEO; GSM2527317 GEO; GSM2527318 GEO; GSM2527319 GEO; GSM3070588 | |||||||||
Polymorphism and mutation databases | Cosmic; 1029465
Cosmic; 1873953 Cosmic; 2607430 Cosmic; 2805388 | |||||||||
Entry history | ||||||||||
Entry creation | 04-Apr-2012 | |||||||||
Last entry update | 30-Jan-2024 | |||||||||
Version number | 17 |