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Cellosaurus SAT [Human HNSCC] (CVCL_3160)

[Text version]
Cell line name SAT [Human HNSCC]
Synonyms Sat
Accession CVCL_3160
Resource Identification Initiative To cite this cell line use: SAT [Human HNSCC] (RRID:CVCL_3160)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: COSMIC cell lines project.
Population: Japanese.
Characteristics: Established from a nude mouse xenograft.
Doubling time: 72 hours (PubMed=10601556).
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Deep exome analysis.
Omics: Deep quantitative proteome analysis.
Omics: DNA methylation analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis by microarray.
Genome ancestry Source: PubMed=30894373

Origin% genome
African0.32
Native American1.29
East Asian, North77.72
East Asian, South18.87
South Asian0
European, North1.81
European, South0
Disease Head and neck squamous cell carcinoma (NCIt: C34447)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Category Cancer cell line
STR profile Source(s): Cosmic-CLP; DepMap; JCRB

Markers:
AmelogeninX
CSF1PO11
D3S135817
D5S81813
D7S82011,12
D8S117913,14
D13S31710,12
D16S53910,12
D18S5118
D21S1129,32.1
FGA24
Penta D8,13
Penta E12
TH019
TPOX9,11
vWA14,18

Run an STR similarity search on this cell line
Publications

PubMed=10601556; DOI=10.3892/ijo.16.1.119
Nii M., Kayada Y., Yoshiga K., Takada K., Okamoto T., Yanagihara K.
Suppression of metastasis by tissue inhibitor of metalloproteinase-1 in a newly established human oral squamous cell carcinoma cell line.
Int. J. Oncol. 16:119-124(2000)

PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458
Rothenberg S.M., Mohapatra G., Rivera M.N., Winokur D., Greninger P., Nitta M., Sadow P.M., Sooriyakumar G., Brannigan B.W., Ulman M.J., Perera R.M., Wang R., Tam A., Ma X.-J., Erlander M., Sgroi D.C., Rocco J.W., Lingen M.W., Cohen E.E.W., Louis D.N., Settleman J., Haber D.A.
A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.
Cancer Res. 70:2158-2164(2010)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017
Iorio F., Knijnenburg T.A., Vis D.J., Bignell G.R., Menden M.P., Schubert M., Aben N., Goncalves E., Barthorpe S., Lightfoot H., Cokelaer T., Greninger P., van Dyk E., Chang H., de Silva H., Heyn H., Deng X.-M., Egan R.K., Liu Q.-S., Mironenko T., Mitropoulos X., Richardson L., Wang J.-H., Zhang T.-H., Moran S., Sayols S., Soleimani M., Tamborero D., Lopez-Bigas N., Ross-Macdonald P., Esteller M., Gray N.S., Haber D.A., Stratton M.R., Benes C.H., Wessels L.F.A., Saez-Rodriguez J., McDermott U., Garnett M.J.
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747
Dutil J., Chen Z.-H., Monteiro A.N.A., Teer J.K., Eschrich S.A.
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010
Goncalves E., Poulos R.C., Cai Z.-X., Barthorpe S., Manda S.S., Lucas N., Beck A., Bucio-Noble D., Dausmann M., Hall C., Hecker M., Koh J., Lightfoot H., Mahboob S., Mali I., Morris J., Richardson L., Seneviratne A.J., Shepherd R., Sykes E., Thomas F., Valentini S., Williams S.G., Wu Y.-X., Xavier D., MacKenzie K.L., Hains P.G., Tully B., Robinson P.J., Zhong Q., Garnett M.J., Reddel R.R.
Pan-cancer proteomic map of 949 human cell lines.
Cancer Cell 40:835-849.e8(2022)

Cross-references
Cell line collections (Providers) JCRB; JCRB1027
JCRB; NIHS0257 - Discontinued
Cell line databases/resources CLO; CLO_0009952
cancercelllines; CVCL_3160
Cell_Model_Passport; SIDM00350
Cosmic-CLP; 1299050
DepMap; ACH-001641
LINCS_LDP; LCL-1210
Biological sample resources BioSample; SAMN03472538
Chemistry resources GDSC; 1299050
PharmacoDB; SAT_1346_2019
Encyclopedic resources Wikidata; Q54952126
Gene expression databases ArrayExpress; E-MTAB-3610
GEO; GSM827190
GEO; GSM1670403
Polymorphism and mutation databases Progenetix; CVCL_3160
Proteomic databases PRIDE; PXD030304
Sequence databases EGA; EGAS00001000978
Entry history
Entry creation04-Apr-2012
Last entry update05-Oct-2023
Version number28