Cell line name |
HT29/219 |
Synonyms |
HT-29/219; HT29219 |
Accession |
CVCL_2521 |
Secondary accession |
CVCL_6835 |
Resource Identification Initiative |
To cite this cell line use: HT29/219 (RRID:CVCL_2521) |
Comments |
Part of: MD Anderson Cell Lines Project. Population: Caucasian. Omics: Protein expression by reverse-phase protein arrays. Derived from site: In situ; Colon; UBERON=UBERON_0001155. |
Sequence variations |
- Mutation; HGNC; 583; APC; Simple; p.Glu853Ter (c.2557G>T); ClinVar=VCV001071632; Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 583; APC; Simple; p.Thr1556Asnfs*3 (c.4666dupA) (c.4666_4667insA); ClinVar=VCV000428112; Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 1097; BRAF; Simple; p.Val600Glu (c.1799T>A); ClinVar=VCV000013961; Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 8975; PIK3CA; Simple; p.Pro449Thr (c.1345C>A); ClinVar=VCV001333250; Zygosity=Heterozygous (from parent cell line).
- Mutation; HGNC; 6770; SMAD4; Simple; p.Gln311Ter (c.931C>T); ClinVar=VCV000230663; Zygosity=Homozygous (from parent cell line).
- Mutation; HGNC; 11998; TP53; Simple; p.Arg273His (c.818G>A); ClinVar=VCV000012366; Zygosity=Homozygous (from parent cell line).
|
Disease |
Colon adenocarcinoma (NCIt: C4349) |
Species of origin |
Homo sapiens (Human)
(NCBI Taxonomy: 9606) |
Hierarchy |
Parent: CVCL_0320 (HT-29) |
Sex of cell |
Female |
Age at sampling |
44Y |
Category |
Cancer cell line |
STR profile |
Source(s): ECACC=85061109; PubMed=17254797
Markers:Amelogenin | X |
CSF1PO | 11 (PubMed=17254797) 11,12 (ECACC=85061109) |
D3S1358 | 15,17 |
D5S818 | 11,12 |
D7S820 | 10 |
D8S1179 | 10 |
D13S317 | 11 (PubMed=17254797) 11,12 (ECACC=85061109) |
D16S539 | 11,12 |
D18S51 | 13 |
D21S11 | 28,30 |
FGA | 19,21 |
TH01 | 6,9 |
TPOX | 8,9 |
vWA | 17,19 |
Run an STR similarity search on this cell line |
Web pages |
https://tcpaportal.org/mclp/ |
Publications | PubMed=17254797; DOI=10.1016/j.biologicals.2006.10.001 Azari S., Ahmadi N., Jeddi-Tehrani M., Shokri F. Profiling and authentication of human cell lines using short tandem repeat (STR) loci: report from the National Cell Bank of Iran. Biologicals 35:195-202(2007) PubMed=28196595; DOI=10.1016/j.ccell.2017.01.005; PMCID=PMC5501076 Li J., Zhao W., Akbani R., Liu W.-B., Ju Z.-L., Ling S.-Y., Vellano C.P., Roebuck P., Yu Q.-H., Eterovic A.K., Byers L.A., Davies M.A., Deng W.-L., Gopal Y.N.V., Chen G., von Euw E.M., Slamon D.J., Conklin D., Heymach J.V., Gazdar A.F., Minna J.D., Myers J.N., Lu Y.-L., Mills G.B., Liang H. Characterization of human cancer cell lines by reverse-phase protein arrays. Cancer Cell 31:225-239(2017) |
Cross-references |
Cell line collections (Providers) |
ECACC; 85061109
NCBI_Iran; C154
|
Cell line databases/resources |
CLO; CLO_0004285
CLDB; cl1758
cancercelllines; CVCL_2521
|
Anatomy/cell type resources |
BTO; BTO:0002838
|
Encyclopedic resources |
Wikidata; Q54896595
|
Entry history |
Entry creation | 04-Apr-2012 |
Last entry update | 02-May-2024 |
Version number | 26 |
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