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Cellosaurus ML-DmD4-c1 (CVCL_Z784)

[Text version]
Cell line name ML-DmD4-c1
Synonyms D4-c1; D4c1
Accession CVCL_Z784
Resource Identification Initiative To cite this cell line use: ML-DmD4-c1 (RRID:CVCL_Z784)
Comments Group: Insect cell line.
Part of: modENCODE project cell lines.
Doubling time: 33 hours (DGRC=126).
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Imaginal disc; UBERON=UBERON_0000939.
Species of origin Drosophila melanogaster (Fruit fly) (NCBI Taxonomy: 7227)
Hierarchy Parent: CVCL_Z750 (ML-DmD4)
Sex of cell Male
Age at sampling Third instar larval stage
Category Spontaneously immortalized cell line
Publications

PubMed=21177962; DOI=10.1101/gr.112961.110; PMCID=PMC3032933
Cherbas L., Willingham A., Zhang D.-Y., Yang L., Zou Y., Eads B.D., Carlson J.W., Landolin J.M., Kapranov P., Dumais J., Samsonova A., Choi J.-H., Roberts J., Davis C.A., Tang H.-X., van Baren M.J., Ghosh S., Dobin A., Bell K., Lin W., Langton L., Duff M.O., Tenney A.E., Zaleski C., Brent M.R., Hoskins R.A., Kaufman T.C., Andrews J., Graveley B.R., Perrimon N., Celniker S.E., Gingeras T.R., Cherbas P.
The transcriptional diversity of 25 Drosophila cell lines.
Genome Res. 21:301-314(2011)

PubMed=24434506; DOI=10.1016/j.ymeth.2014.01.006; PMCID=PMC4048767
Cherbas L., Gong L.
Cell lines.
Methods 68:74-81(2014)

PubMed=24985917; DOI=10.1101/gr.161554.113; PMCID=PMC4079977
Wen J.-Y., Mohammed J., Bortolamiol-Becet D., Tsai H., Robine N., Westholm J.O., Ladewig E., Dai Q., Okamura K., Flynt A.S., Zhang D.-Y., Andrews J., Cherbas L., Kaufman T.C., Cherbas P., Siepel A.C., Lai E.C.
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines.
Genome Res. 24:1236-1250(2014)

PubMed=25262759; DOI=10.1186/gb-2014-15-8-r70; PMCID=PMC4289277
Lee H., McManus C.J., Cho D.-Y., Eaton M., Renda F., Somma M.P., Cherbas L., May G., Powell S., Zhang D.-Y., Zhan L.-J., Resch A., Andrews J., Celniker S.E., Cherbas P., Przytycka T.M., Gatti M., Oliver B., Graveley B.R., MacAlpine D.
DNA copy number evolution in Drosophila cell lines.
Genome Biol. 15:R70.1-R70.20(2014)

PubMed=26772746; DOI=10.1534/g3.115.023366; PMCID=PMC4777130
Stoiber M., Celniker S.E., Cherbas L., Brown B., Cherbas P.
Diverse hormone response networks in 41 independent Drosophila cell lines.
G3 (Bethesda) 6:683-694(2016)

Cross-references
Cell line collections (Providers) DGRC; 126
Cell line databases/resources FlyBase_Cell_line; FBtc0000126
Biological sample resources ENCODE; ENCBS483XFL
Encyclopedic resources Wikidata; Q54905927
Experimental variables resources EFO; EFO_0005831
Gene expression databases GEO; GSM278139
GEO; GSM278140
GEO; GSM278153
GEO; GSM278154
GEO; GSM278155
GEO; GSM278186
GEO; GSM278187
GEO; GSM278229
GEO; GSM278230
GEO; GSM278231
GEO; GSM278327
GEO; GSM279695
GEO; GSM279696
GEO; GSM279697
GEO; GSM279698
Entry history
Entry creation10-Apr-2015
Last entry update29-Jun-2023
Version number12