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Cellosaurus FHS048i-sh25727G (CVCL_YY79)

[Text version]
Cell line name FHS048i-sh25727G
Synonyms iPSC - 25727G
Accession CVCL_YY79
Resource Identification Initiative To cite this cell line use: FHS048i-sh25727G (RRID:CVCL_YY79)
Comments Part of: Framingham Heart Study (FHS) collection.
Part of: Next Generation Genetic Association studies (Next Gen) program cell lines.
Population: Caucasian.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Sequence variations
  • Mutation; HGNC; 3231; CELSR2; Simple; c.*919G>T; dbSNP=rs12740374; Zygosity=Homozygous; Note=Minor haplotype (PubMed=28388431).
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_YY78 ! FHS047i-sh25727B
Sex of cell Male
Age at sampling 51-60Y
Category Induced pluripotent stem cell
Publications

PubMed=28388431; DOI=10.1016/j.stem.2017.01.010
Warren C.R., O'Sullivan J.F., Friesen M., Becker C.E., Zhang X.-L., Liu P.-C., Wakabayashi Y., Morningstar J.E., Shi X., Choi J., Xia F., Peters D.T., Florido M.H.C., Tsankov A.M., Duberow E.A., Comisar L., Shay J., Jiang X., Meissner A., Musunuru K., Kathiresan S., Daheron L., Zhu J., Gerszten R.E., Deo R.C., Vasan R.S., O'Donnell C.J., Cowan C.A.
Induced pluripotent stem cell differentiation enables functional validation of GWAS variants in metabolic disease.
Cell Stem Cell 20:547-557.e7(2017)

Cross-references
Cell line collections (Providers) WiCell; fhs048i-sh25727g
Biological sample resources BioSample; SAMN06093720
Encyclopedic resources Wikidata; Q98126191
Gene expression databases GEO; GSM2411826
Entry history
Entry creation02-Jul-2020
Last entry update29-Jun-2023
Version number7