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Cellosaurus FHS031i-sh16939A (CVCL_YY62)

[Text version]
Cell line name FHS031i-sh16939A
Synonyms iPSC - 16939A
Accession CVCL_YY62
Resource Identification Initiative To cite this cell line use: FHS031i-sh16939A (RRID:CVCL_YY62)
Comments Part of: Framingham Heart Study (FHS) collection.
Part of: Next Generation Genetic Association studies (Next Gen) program cell lines.
Population: Caucasian.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Sequence variations
  • Mutation; HGNC; 3231; CELSR2; Simple; c.*919G>T; dbSNP=rs12740374; Zygosity=Homozygous; Note=Minor haplotype (PubMed=28388431).
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_YY63 ! FHS032i-sh16939B
Sex of cell Female
Age at sampling 71-80Y
Category Induced pluripotent stem cell
Publications

PubMed=28388431; DOI=10.1016/j.stem.2017.01.010
Warren C.R., O'Sullivan J.F., Friesen M., Becker C.E., Zhang X.-L., Liu P.-C., Wakabayashi Y., Morningstar J.E., Shi X., Choi J., Xia F., Peters D.T., Florido M.H.C., Tsankov A.M., Duberow E.A., Comisar L., Shay J., Jiang X., Meissner A., Musunuru K., Kathiresan S., Daheron L., Zhu J., Gerszten R.E., Deo R.C., Vasan R.S., O'Donnell C.J., Cowan C.A.
Induced pluripotent stem cell differentiation enables functional validation of GWAS variants in metabolic disease.
Cell Stem Cell 20:547-557.e7(2017)

Cross-references
Cell line collections (Providers) WiCell; fhs031i-sh16939a
Biological sample resources BioSample; SAMN06093731
Encyclopedic resources Wikidata; Q98126094
Gene expression databases GEO; GSM2411815
Entry history
Entry creation02-Jul-2020
Last entry update29-Jun-2023
Version number7