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Cellosaurus FHS025i-sh1649A (CVCL_YY56)

[Text version]
Cell line name FHS025i-sh1649A
Synonyms iPSC - 1649A
Accession CVCL_YY56
Resource Identification Initiative To cite this cell line use: FHS025i-sh1649A (RRID:CVCL_YY56)
Comments Part of: Framingham Heart Study (FHS) collection.
Part of: Next Generation Genetic Association studies (Next Gen) program cell lines.
Population: Caucasian.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Sequence variations
  • Mutation; HGNC; 3231; CELSR2; Simple; c.*919G; dbSNP=rs12740374; Zygosity=Homozygous; Note=Major haplotype (PubMed=28388431).
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_YY57 ! FHS026i-sh1649B
Sex of cell Female
Age at sampling 61-70Y
Category Induced pluripotent stem cell
Publications

PubMed=28388431; DOI=10.1016/j.stem.2017.01.010
Warren C.R., O'Sullivan J.F., Friesen M., Becker C.E., Zhang X.-L., Liu P.-C., Wakabayashi Y., Morningstar J.E., Shi X., Choi J., Xia F., Peters D.T., Florido M.H.C., Tsankov A.M., Duberow E.A., Comisar L., Shay J., Jiang X., Meissner A., Musunuru K., Kathiresan S., Daheron L., Zhu J., Gerszten R.E., Deo R.C., Vasan R.S., O'Donnell C.J., Cowan C.A.
Induced pluripotent stem cell differentiation enables functional validation of GWAS variants in metabolic disease.
Cell Stem Cell 20:547-557.e7(2017)

Cross-references
Cell line collections (Providers) WiCell; fhs025i-sh1649a
Biological sample resources BioSample; SAMN06093674
Encyclopedic resources Wikidata; Q98126087
Gene expression databases GEO; GSM2411769
Entry history
Entry creation02-Jul-2020
Last entry update29-Jun-2023
Version number7