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Cellosaurus FHS009i-sh12888A (CVCL_YY40)

[Text version]
Cell line name FHS009i-sh12888A
Synonyms iPSC - 12888A
Accession CVCL_YY40
Resource Identification Initiative To cite this cell line use: FHS009i-sh12888A (RRID:CVCL_YY40)
Comments Part of: Framingham Heart Study (FHS) collection.
Part of: Next Generation Genetic Association studies (Next Gen) program cell lines.
Population: Caucasian.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Sequence variations
  • Mutation; HGNC; 3231; CELSR2; Simple; c.*919G>T; dbSNP=rs12740374; Zygosity=Homozygous; Note=Minor haplotype (PubMed=28388431).
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_YY41 ! FHS010i-sh12888B
Sex of cell Female
Age at sampling 51-60Y
Category Induced pluripotent stem cell
Publications

PubMed=28388431; DOI=10.1016/j.stem.2017.01.010
Warren C.R., O'Sullivan J.F., Friesen M., Becker C.E., Zhang X.-L., Liu P.-C., Wakabayashi Y., Morningstar J.E., Shi X., Choi J., Xia F., Peters D.T., Florido M.H.C., Tsankov A.M., Duberow E.A., Comisar L., Shay J., Jiang X., Meissner A., Musunuru K., Kathiresan S., Daheron L., Zhu J., Gerszten R.E., Deo R.C., Vasan R.S., O'Donnell C.J., Cowan C.A.
Induced pluripotent stem cell differentiation enables functional validation of GWAS variants in metabolic disease.
Cell Stem Cell 20:547-557.e7(2017)

Cross-references
Cell line collections (Providers) WiCell; fhs009i-sh12888a
Biological sample resources BioSample; SAMN06093743
Encyclopedic resources Wikidata; Q98126046
Gene expression databases GEO; GSM2411803
Entry history
Entry creation02-Jul-2020
Last entry update29-Jun-2023
Version number7