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Cellosaurus S006006 (CVCL_V933)

[Text version]
Cell line name S006006
Synonyms Clint
Accession CVCL_V933
Resource Identification Initiative To cite this cell line use: S006006 (RRID:CVCL_V933)
Comments Group: Non-human primate cell line.
Part of: Yerkes National Primate Research Center cell line collection.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: MHC region genome.
Omics: Transcriptome analysis by microarray.
Donor information: Established from Clint, the 'reference' genome chimpanzee.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Pan troglodytes (Chimpanzee) (NCBI Taxonomy: 9598)
Originate from same individual CVCL_V934 ! S006007
CVCL_V938 ! S008395
CVCL_V940 ! S008397
Sex of cell Male
Age at sampling 22Y
Category Transformed cell line
Web pages https://www.newscientist.com/article/dn6843-genome-project-chimp-dies-unexpectedly/
Publications

PubMed=19043577; DOI=10.1371/journal.pgen.1000287; PMCID=PMC2583954
Choy E., Yelensky R., Bonakdar S., Plenge R.M., Saxena R., De Jager P.L., Shaw S.Y., Wolfish C.S., Slavik J.M., Cotsapas C., Rivas M.A., Dermitzakis E.T., Cahir-McFarland E., Kieff E.D., Hafler D.A., Daly M.J., Altshuler D.M.
Genetic analysis of human traits in vitro: drug response and gene expression in lymphoblastoid cell lines.
PLoS Genet. 4:E1000287-E1000287(2008)

PubMed=28360230; DOI=10.1101/gr.213538.116; PMCID=PMC5411776
Norman P.J., Norberg S.J., Guethlein L.A., Nemat-Gorgani N., Royce T., Wroblewski E.E., Dunn T., Mann T., Alicata C., Hollenbach J.A., Chang W.-H., Shults Won M., Gunderson K.L., Abi-Rached L., Ronaghi M., Parham P.
Sequences of 95 human MHC haplotypes reveal extreme coding variation in genes other than highly polymorphic HLA class I and II.
Genome Res. 27:813-823(2017)

Cross-references
Cell line collections (Providers) Coriell; S006006 - Discontinued
Cell line databases/resources CLO; CLO_0020175
Biological sample resources BioSamples; SAME42383
Encyclopedic resources Wikidata; Q54951728
Gene expression databases GEO; GSM291957
GEO; GSM291958
GEO; GSM291959
Entry history
Entry creation16-Apr-2014
Last entry update29-Jun-2023
Version number14