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Cellosaurus HMS001 (CVCL_UH26)

[Text version]
Cell line name HMS001
Synonyms HMS-001
Accession CVCL_UH26
Resource Identification Initiative To cite this cell line use: HMS001 (RRID:CVCL_UH26)
Comments Virology: Contains from 1 to 2 copies of the HPV16 genome (PubMed=24201445).
Doubling time: 5 days (PubMed=29156801).
Transformant: NCBI_TaxID; 333760; Human papillomavirus type 16 (HPV16).
Omics: Deep exome analysis.
Omics: Protein expression by reverse-phase protein arrays.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Oral cavity, tonsil, tonsillar fossa; UBERON=UBERON_0035228.
Disease Tonsillar squamous cell carcinoma (NCIt: C8183)
Squamous cell carcinoma of the oral cavity (ORDO: Orphanet_502363)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling Age unspecified
Category Cancer cell line
STR profile Source(s): PubMed=29156801

Markers:
AmelogeninX,Y
CSF1PO11
D5S81811,12
D7S82012
D13S3178
D16S5399,12
TH016
TPOX8
vWA17

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Publications

PubMed=24201445; DOI=10.1101/gr.164806.113; PMCID=PMC3912410
Akagi K., Li J.-F., Broutian T.R., Padilla-Nash H.M., Xiao W.-H., Jiang B., Rocco J.W., Teknos T.N., Kumar B., Wangsa D., He D., Ried T., Symer D.E., Gillison M.L.
Genome-wide analysis of HPV integration in human cancers reveals recurrent, focal genomic instability.
Genome Res. 24:185-199(2014)

PubMed=29156801; DOI=10.18632/oncotarget.21174; PMCID=PMC5689691
Kalu N.N., Mazumdar T., Peng S.-H., Shen L., Sambandam V., Rao X.-Y., Xi Y.-X., Li L.-R., Qi Y., Gleber-Netto F.O., Patel A., Wang J., Frederick M.J., Myers J.N., Pickering C.R., Johnson F.M.
Genomic characterization of human papillomavirus-positive and -negative human squamous cell cancer cell lines.
Oncotarget 8:86369-86383(2017)

Cross-references
Encyclopedic resources Wikidata; Q94213311
Entry history
Entry creation13-Nov-2018
Last entry update29-Jun-2023
Version number6