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Cellosaurus M980513 (CVCL_S675)

[Text version]
Cell line name M980513
Accession CVCL_S675
Resource Identification Initiative To cite this cell line use: M980513 (RRID:CVCL_S675)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
From: URPP Biobank, University of Zurich; Zurich; Switzerland.
Omics: Deep exome analysis.
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Miscellaneous: Age/sex of donor and metastatic site from personal communication of URPP Biobank.
Derived from site: Metastatic; Iliac lymph node; UBERON=UBERON_0015878.
Sequence variations
  • Mutation; HGNC; HGNC:1097; BRAF; Simple; p.Val600Glu (c.1799T>A); ClinVar=VCV000013961; Zygosity=Unspecified (PubMed=16827748; DepMap=ACH-002338).
Disease Melanoma (NCIt: C3224)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling 32Y
Category Cancer cell line
Publications

PubMed=16827748; DOI=10.1111/j.1600-0749.2006.00322.x
Hoek K.S., Schlegel N.C., Brafford P., Sucker A., Ugurel S., Kumar R., Weber B.L., Nathanson K.L., Phillips D.J., Herlyn M., Schadendorf D., Dummer R.
Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.
Pigment Cell Res. 19:290-302(2006)

PubMed=18245463; DOI=10.1158/0008-5472.CAN-07-2491
Hoek K.S., Eichhoff O.M., Schlegel N.C., Dobbeling U., Kobert N., Schaerer L., Hemmi S., Dummer R.
In vivo switching of human melanoma cells between proliferative and invasive states.
Cancer Res. 68:650-656(2008)

PubMed=22336146; DOI=10.1111/j.1755-148X.2012.00986.x
Widmer D.S., Cheng P.F., Eichhoff O.M., Belloni B.C., Zipser M.C., Schlegel N.C., Javelaud D., Mauviel A., Dummer R., Hoek K.S.
Systematic classification of melanoma cells by phenotype-specific gene expression mapping.
Pigment Cell Melanoma Res. 25:343-353(2012)

PubMed=33445472; DOI=10.3390/ncrna7010005; PMCID=PMC7838980
Tusup M., Cheng P.F., Picardi E., Raziunaite A., Dummer R., Levesque M.P., French L.E., Guenova E., Kundig T.M., Pascolo S.
Evaluation of the interplay between the ADAR editome and immunotherapy in melanoma.
Noncoding RNA 7:5.1-5.11(2021)

Cross-references
Cell line databases/resources cancercelllines; CVCL_S675
Cell_Model_Passport; SIDM00177
DepMap; ACH-002338
Chemistry resources PharmacoDB; M980513_880_2019
Encyclopedic resources Wikidata; Q54903663
Gene expression databases GEO; GSM108371
GEO; GSM108382
GEO; GSM4933088
Polymorphism and mutation databases Cosmic; 1723794
Entry history
Entry creation03-Feb-2014
Last entry update19-Dec-2024
Version number21