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Cellosaurus NZM047 (CVCL_S424)

[Text version]
Cell line name NZM047
Synonyms NZM47
Accession CVCL_S424
Resource Identification Initiative To cite this cell line use: NZM047 (RRID:CVCL_S424)
Comments Omics: Deep exome analysis.
Omics: Transcriptome analysis by RNAseq.
Sequence variations
  • Mutation; HGNC; HGNC:4379; GNA11; Simple; p.Gln209Leu (c.626A>T); ClinVar=VCV000376002; Zygosity=Heterozygous (PubMed=32567790).
  • Mutation; HGNC; HGNC:7765; NF1; Simple; p.Asn1112fs; Zygosity=Unspecified (PubMed=32567790).
  • Mutation; HGNC; HGNC:7765; NF1; Simple; p.Gln2582Ter (c.7744C>T); Zygosity=Unspecified (PubMed=32567790).
  • Mutation; HGNC; HGNC:11730; TERT; Simple; c.1-146C>T (c.250C>T) (C250T); Zygosity=Unspecified; Note=In promoter (PubMed=32567790).
HLA typing Source: PubMed=32567790
Class I
HLA-AA*03:01,03:01
HLA-BB*35:01,44:02
HLA-CC*04:01,05:01
Disease Melanoma (NCIt: C3224)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_S426 ! NZM041
Category Cancer cell line
STR profile Source(s): PubMed=32567790

Markers:
AmelogeninX
CSF1PO10,11
D2S133819,20
D3S135815,16
D5S81812,13
D7S82010
D8S117913,15
D13S3178,11
D16S53911,12
D18S5112,19
D19S43313,14
D21S1129,30
FGA25,26
TH016,9.3
TPOX8,9
vWA16

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Publications

PubMed=32567790; DOI=10.1111/pcmr.12908; PMCID=PMC7818249
Tran K.B., Gimenez G., Tsai P., Kolekar S., Rodger E.J., Chatterjee A., Jabed A., Shih J.-H., Joseph W.R., Marshall E.S., Wang Q., Print C.G., Eccles M.R., Baguley B.C., Shepherd P.R.
Genomic and signalling pathway characterization of the NZM panel of melanoma cell lines: a valuable model for studying the impact of genetic diversity in melanoma.
Pigment Cell Melanoma Res. 34:136-143(2021)

Cross-references
Cell line databases/resources cancercelllines; CVCL_S424
Biological sample resources BioSample; SAMN14558342
Encyclopedic resources Wikidata; Q54931581
Entry history
Entry creation05-Nov-2013
Last entry update19-Dec-2024
Version number9