ID   G-401 BAF47
SY   G401 BAF47; G401_BAF47
DR   GEO; GSM2409664
DR   GEO; GSM2409665
DR   GEO; GSM2409666
DR   GEO; GSM2409667
DR   GEO; GSM2409668
DR   GEO; GSM2409669
DR   GEO; GSM2787353
DR   Wikidata; Q54835348
RX   PubMed=28945250;
CC   Problematic cell line: Misclassified. Parent cell line (G-401) was originally thought to be a Wilms tumor cell line but is a kidney rhabdoid tumor cell line.
CC   Population: Caucasian.
CC   Characteristics: Transfection of SMARCB1 rescues the phenotype of the parent cell line which is homozygous for its deletion.
CC   Transfected with: HGNC; 11103; SMARCB1.
CC   Omics: H3K27ac ChIP-seq epigenome analysis.
CC   Omics: H3K27me3 ChIP-seq epigenome analysis.
CC   Omics: H3K4me3 ChIP-seq epigenome analysis.
CC   Omics: Transcriptome analysis by RNAseq.
CC   Derived from site: In situ; Kidney; UBERON=UBERON_0002113.
DI   NCIt; C8715; Rhabdoid tumor of the kidney
DI   ORDO; Orphanet_69077; Rhabdoid tumor
OX   NCBI_TaxID=9606; ! Homo sapiens (Human)
HI   CVCL_0270 ! G-401
SX   Male
AG   3M
CA   Cancer cell line
DT   Created: 15-11-17; Last updated: 29-06-23; Version: 8
RX   PubMed=28945250; DOI=10.1038/ng.3958;
RA   Nakayama R.T., Pulice J.L., Valencia A.M., McBride M.J.,
RA   McKenzie Z.M., Gillespie M.A., Ku W.L., Teng M.-X., Cui K.-R.,
RA   Williams R.T., Cassel S.H., Qing H., Widmer C.J., Demetri G.D.,
RA   Irizarry R.A., Zhao K.-J., Ranish J.A., Kadoch C.;
RT   "SMARCB1 is required for widespread BAF complex-mediated activation of
RT   enhancers and bivalent promoters.";
RL   Nat. Genet. 49:1613-1623(2017).