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Cellosaurus GM07439 (CVCL_N063)

[Text version]
Cell line name GM07439
Synonyms GM17164
Accession CVCL_N063
Resource Identification Initiative To cite this cell line use: GM07439 (RRID:CVCL_N063)
Comments Part of: Genetic Testing Reference Material (GeT-RM) samples.
Part of: Human variation panel.
Population: African American.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: DNA methylation analysis.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
HLA typing Source: IPD-IMGT/HLA=23057
Class I
HLA-AA*29:02,68:02
HLA-BB*42:02,53:01
HLA-CC*04:CVAF,17:MN
Class II
HLA-DRDRB1*04:03,15:03

Source: PubMed=29959025
Class I
HLA-AA*29:02:01,68:02:01
HLA-BB*42:02:01,53:01:01
HLA-CC*04:01:01,17:01:01
Class II
HLA-DPDPA1*02:02:02,03:01
DPB1*01:01:01,105:01:01
HLA-DQDQA1*01:02:01,03:01:01
DQB1*03:02:01,06:02:01
HLA-DRDRB1*04:03:01,15:03:01
DRB4*01:03:01
DRB5*01:01:01
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling Age unspecified
Category Transformed cell line
Publications

CLPUB00447
Mulivor R.A., Suchy S.F.
1992/1993 catalog of cell lines. NIGMS human genetic mutant cell repository. 16th edition. October 1992.
(In) Institute for Medical Research (Camden, N.J.) NIH 92-2011; pp.1-918; National Institutes of Health; Bethesda (1992)

PubMed=16260726; DOI=10.1073/pnas.0508390102
Harris S.L., Gil G., Robins H., Hu W.-W., Hirshfield K.M., Bond E., Bond G., Levine A.J.
Detection of functional single-nucleotide polymorphisms that affect apoptosis.
Proc. Natl. Acad. Sci. U.S.A. 102:16297-16302(2005)

PubMed=20889555; DOI=10.2353/jmoldx.2010.100090
Pratt V.M., Zehnbauer B.A., Wilson J.A., Epstein-Baak R., Babic N., Bettinotti M.P., Buller-Burckle A.M., Butz K.G., Campbell M., Civalier C., El-Badry A., Farkas D.H., Lyon E., Mandal S., McKinney J., Muralidharan K., Noll L., Sander T., Shabbeer J., Smith C.-Y.H., Telatar M., Toji L.H., Vairavan A., Vance C., Weck K.E., Wu A.H.B., Yeo K.-T.J., Zeller M., Kalman L.V.
Characterization of 107 genomic DNA reference materials for CYP2D6, CYP2C19, CYP2C9, VKORC1, and UGT1A1: a GeT-RM and Association for Molecular Pathology collaborative project.
J. Mol. Diagn. 12:835-846(2010)

PubMed=26621101; DOI=10.1016/j.jmoldx.2015.08.005
Pratt V.M., Everts R.E., Aggarwal P., Beyer B.N., Broeckel U., Epstein-Baak R., Hujsak P., Kornreich R., Liao J., Lorier R., Scott S.A., Smith C.-Y.H., Toji L.H., Turner A., Kalman L.V.
Characterization of 137 genomic DNA reference materials for 28 pharmacogenetic genes: a GeT-RM collaborative project.
J. Mol. Diagn. 18:109-123(2016)

PubMed=29474986; DOI=10.1016/j.jmoldx.2018.01.011
Pratt V.M., Del Tredici A.L., Hachad H., Ji Y., Kalman L.V., Scott S.A., Weck K.E.
Recommendations for clinical CYP2C19 genotyping allele selection: a report of the Association for Molecular Pathology.
J. Mol. Diagn. 20:269-276(2018)

PubMed=29959025; DOI=10.1016/j.jmoldx.2018.05.009
Bettinotti M.P., Ferriola D., Duke J.L., Mosbruger T.L., Tairis N., Jennings L., Kalman L.V., Monos D.S.
Characterization of 108 genomic DNA reference materials for 11 human leukocyte antigen loci: a GeT-RM collaborative project.
J. Mol. Diagn. 20:703-715(2018)

PubMed=31401124; DOI=10.1016/j.jmoldx.2019.06.007
Gaedigk A., Turner A., Everts R.E., Scott S.A., Aggarwal P., Broeckel U., McMillin G.A., Melis R., Boone E.C., Pratt V.M., Kalman L.V.
Characterization of reference materials for genetic testing of CYP2D6 alleles: a GeT-RM collaborative project.
J. Mol. Diagn. 21:1034-1052(2019)

Cross-references
Cell line collections (Providers) Coriell; GM07439
Coriell; GM17164
Cell line databases/resources CLO; CLO_0013994
CLO; CLO_0016861
IPD-IMGT/HLA; 23057
Encyclopedic resources Wikidata; Q54842757
Gene expression databases GEO; GSM569691
GEO; GSM596229
GEO; GSM597063
GEO; GSM617121
GEO; GSM924674
Entry history
Entry creation05-Nov-2013
Last entry update29-Jun-2023
Version number17