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Cellosaurus Mm 290-96 (CVCL_IZ92)

[Text version]
Cell line name Mm 290-96
Synonyms Mm290-1996; 290-96; R290-96
Accession CVCL_IZ92
Resource Identification Initiative To cite this cell line use: Mm 290-96 (RRID:CVCL_IZ92)
Comments Group: Non-human primate cell line.
From: New England Primate Research Center (NEPRC), Harvard Medical School; Boston; USA.
Transformant: NCBI_TaxID; 106332; Papiine herpesvirus 1 (Herpesvirus papio).
Omics: CTCF ChIP-seq epigenome analysis.
Omics: H3K27ac ChIP-seq epigenome analysis.
Omics: H3K27me3 ChIP-seq epigenome analysis.
Omics: H3K4me1 ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: YY1 ChIP-seq epigenome analysis.
Omics: Deep proteome analysis.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Macaca mulatta (Rhesus macaque) (NCBI Taxonomy: 9544)
Sex of cell Male
Category Transformed cell line
Publications

PubMed=21321133; DOI=10.1534/genetics.110.126177
Cain C.E., Blekhman R., Marioni J.C., Gilad Y.
Gene expression differences among primates are associated with changes in a histone epigenetic modification.
Genetics 187:1225-1234(2011)

PubMed=24136357; DOI=10.1126/science.1242379
Khan Z., Ford M.J., Cusanovich D.A., Mitrano A., Pritchard J.K., Gilad Y.
Primate transcript and protein expression levels evolve under compensatory selection pressures.
Science 342:1100-1104(2013)

PubMed=24380390; DOI=10.1186/gb-2013-14-12-r148
Schwalie P.C., Ward M.C., Cain C.E., Faure A.J., Gilad Y., Odom D.T., Flicek P.
Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes.
Genome Biol. 14:R148.1-R148.15(2013)

PubMed=25468404; DOI=10.1186/s13059-014-0547-3
Zhou X., Cain C.E., Myrthil M., Lewellen N., Michelini K., Davenport E.R., Stephens M., Pritchard J.K., Gilad Y.
Epigenetic modifications are associated with inter-species gene expression variation in primates.
Genome Biol. 15:547.1-547.19(2014)

Cross-references
Encyclopedic resources Wikidata; Q54905994
Gene expression databases ArrayExpress; E-MTAB-1511
GEO; GSM1204875
GEO; GSM1468913
GEO; GSM1468921
GEO; GSM1468928
GEO; GSM1468936
GEO; GSM1468944
GEO; GSM1468952
Proteomic databases PRIDE; PXD000419
Entry history
Entry creation15-May-2017
Last entry update30-Jan-2024
Version number8