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Cellosaurus XP4PA-SV-EB (CVCL_F625)

[Text version]
Cell line name XP4PA-SV-EB
Synonyms GM15983
Accession CVCL_F625
Resource Identification Initiative To cite this cell line use: XP4PA-SV-EB (RRID:CVCL_F625)
Comments Genetic integration: Method=Transfection/transduction; Gene=UniProtKB; P03211; Epstein-Barr virus (strain B95-8) EBNA1.
Transformant: NCBI_TaxID; 1891767; Simian virus 40 (SV40) (Note=pLASwt).
Derived from site: In situ; Amniotic fluid; UBERON=UBERON_0000173.
Sequence variations
  • Mutation; HGNC; HGNC:12816; XPC; Simple; p.Val548Alafs*25 (c.1639_1640TG[2]) (c.1643_1644delTG) (1744_1745delTG); ClinVar=VCV000000262; Zygosity=Heterozygous (from parent cell line).
Disease Xeroderma pigmentosum, complementation group C (NCIt: C114770)
Xeroderma pigmentosum (ORDO: Orphanet_910)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_6E33 (XP4PA(SV))
Children:
CVCL_F627 (XP4PA-SE1)CVCL_F628 (XP4PA-SE2)
Sex of cell Male
Age at sampling Fetus
Category Transformed cell line
Publications

PubMed=1660831; DOI=10.1016/0378-1119(91)90328-9
Peterson C.A., Legerski R.J.
High-frequency transformation of human repair-deficient cell lines by an Epstein-Barr virus-based cDNA expression vector.
Gene 107:279-284(1991)

PubMed=10681431; DOI=10.1073/pnas.040559697; PMCID=PMC15769
Emmert S., Kobayashi N., Khan S.G., Kraemer K.H.
The xeroderma pigmentosum group C gene leads to selective repair of cyclobutane pyrimidine dimers rather than 6-4 photoproducts.
Proc. Natl. Acad. Sci. U.S.A. 97:2151-2156(2000)

PubMed=14662655; DOI=10.1093/hmg/ddh026
Khan S.G., Metin A., Gozukara E.M., Inui H., Shahlavi T., Muniz-Medina V., Baker C.C., Ueda T., Aiken J.R., Schneider T.D., Kraemer K.H.
Two essential splice lariat branchpoint sequences in one intron in a xeroderma pigmentosum DNA repair gene: mutations result in reduced XPC mRNA levels that correlate with cancer risk.
Hum. Mol. Genet. 13:343-352(2004)

PubMed=18955168; DOI=10.1016/j.dnarep.2008.09.007; PMCID=PMC2684809
Khan S.G., Oh K.-S., Emmert S., Imoto K., Tamura D., DiGiovanna J.J., Shahlavi T., Armstrong N., Baker C.C., Neuburg M., Zalewski C., Brewer C.C., Wiggs E., Schiffmann R., Kraemer K.H.
XPC initiation codon mutation in xeroderma pigmentosum patients with and without neurological symptoms.
DNA Repair 8:114-125(2009)

Cross-references
Cell line collections (Providers) Coriell; GM15983
Cell line databases/resources CLO; CLO_0018741
Encyclopedic resources Wikidata; Q54994956
Entry history
Entry creation11-Feb-2013
Last entry update19-Dec-2024
Version number16