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Cellosaurus APD (CVCL_E459)

[Text version]
Cell line name APD
Synonyms GM06817; GM06817A
Accession CVCL_E459
Resource Identification Initiative To cite this cell line use: APD (RRID:CVCL_E459)
Comments Part of: 12th International Histocompatibility Workshop (12IHW) cell line panel.
Population: Caucasian; Dutch.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: MHC region genome.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Cell type: B-cell; CL=CL_0000236.
HLA typing Source: IPD-IMGT/HLA=10258
Class I
HLA-AA*01:01:01:01
HLA-BB*40:01:02:01
HLA-CC*06:02:01:01
Class II
HLA-DPDPA1*01:03
DPB1*04:02:01
HLA-DQDQA1*01:03
DQB1*06:03:01
HLA-DRDRB1*13:01:01

Source: PubMed=30844424
Class I
HLA-AA*01:01:01:01
HLA-BB*40:01:02
HLA-CC*06:02:01:01
Class II
HLA-DPDPA1*01:03:01:05
DPB1*04:02:01:01
HLA-DQDQA1*01:03:01
DQB1*06:03:01
HLA-DRDRB1*13:01:01
DRB3*02:02:01:02
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Sex unspecified
Age at sampling Age unspecified
Category Transformed cell line
Publications

PubMed=6417008; DOI=10.1007/BF00364391
Termijtelen A., Meera Khan P., Shaw S., van Rood J.J.
Mapping SB in relation to HLA and GLO1 using cells from first-cousin marriage offspring.
Immunogenetics 18:503-512(1983)

PubMed=6200433; DOI=10.1007/BF00364762
Brodsky F.M.
A matrix approach to human class II histocompatibility antigens: reactions of four monoclonal antibodies with the products of nine haplotypes.
Immunogenetics 19:179-194(1984)

CLPUB00447
Mulivor R.A., Suchy S.F.
1992/1993 catalog of cell lines. NIGMS human genetic mutant cell repository. 16th edition. October 1992.
(In) Institute for Medical Research (Camden, N.J.) NIH 92-2011; pp.1-918; National Institutes of Health; Bethesda (1992)

PubMed=18193213; DOI=10.1007/s00251-007-0262-2
Horton R., Gibson R., Coggill P., Miretti M.M., Allcock R.J.N., Almeida-King J., Forbes S., Gilbert J.G.R., Halls K., Harrow J.L., Hart E., Howe K.L., Jackson D.K., Palmer S., Roberts A.N., Sims S., Stewart C.A., Traherne J.A., Trevanion S., Wilming L.G., Rogers J., de Jong P.J., Elliott J.F., Sawcer S., Todd J.A., Trowsdale J., Beck S.
Variation analysis and gene annotation of eight MHC haplotypes: the MHC Haplotype Project.
Immunogenetics 60:1-18(2008)

PubMed=28360230; DOI=10.1101/gr.213538.116
Norman P.J., Norberg S.J., Guethlein L.A., Nemat-Gorgani N., Royce T., Wroblewski E.E., Dunn T., Mann T., Alicata C., Hollenbach J.A., Chang W.-H., Shults Won M., Gunderson K.L., Abi-Rached L., Ronaghi M., Parham P.
Sequences of 95 human MHC haplotypes reveal extreme coding variation in genes other than highly polymorphic HLA class I and II.
Genome Res. 27:813-823(2017)

PubMed=29171935; DOI=10.1111/tan.13184
Turner T.R., Hayhurst J.D., Hayward D.R., Bultitude W.P., Barker D.J., Robinson J., Madrigal J.A., Mayor N.P., Marsh S.G.E.
Single molecule real-time DNA sequencing of HLA genes at ultra-high resolution from 126 international HLA and immunogenetics workshop cell lines.
HLA 91:88-101(2018)

PubMed=30844424; DOI=10.1016/j.humimm.2019.03.001
Creary L.E., Guerra S.G., Chong W., Brown C.J., Turner T.R., Robinson J., Bultitude W.P., Mayor N.P., Marsh S.G.E., Saito K., Lam K., Duke J.L., Mosbruger T.L., Ferriola D., Monos D.S., Willis A., Askar M., Fischer G.F., Saw C.L., Ragoussis J., Petrek M., Serra-Pages C., Juan Otero M., Stavropoulos-Giokas C., Dinou A., Ameen R., Al Shemmari S., Spierings E., Gendzekhadze K., Morris G.P., Zhang Q.-H., Kashi Z., Hsu S., Gangavarapu S., Mallempati K.C., Yamamoto F., Osoegawa K., Vayntrub T., Chang C.-J., Hansen J.A., Fernandez-Vina M.A.
Next-generation HLA typing of 382 International Histocompatibility Working Group reference B-lymphoblastoid cell lines: report from the 17th International HLA and Immunogenetics Workshop.
Hum. Immunol. 80:449-460(2019)

Cross-references
Cell line collections (Providers) Coriell; GM06817
ECACC; 94071427
Cell line databases/resources CLO; CLO_0036534
dbMHC; 48477
IHW; IHW09291
IPD-IMGT/HLA; 10258
Encyclopedic resources Wikidata; Q54750311
Entry history
Entry creation22-Oct-2012
Last entry update05-Oct-2023
Version number20