ID   PSB-D
AC   CVCL_D5H0
SY   PSBD
DR   ArrayExpress; E-MTAB-3019
DR   ArrayExpress; E-MTAB-3046
DR   ArrayExpress; E-MTAB-3754
DR   ArrayExpress; E-MTAB-3915
DR   ArrayExpress; E-MTAB-6513
DR   ArrayExpress; E-MTAB-7761
DR   GEO; GSE48793
DR   GEO; GSE53422
DR   PRIDE; PXD001473
DR   PRIDE; PXD001562
DR   PRIDE; PXD008355
DR   PRIDE; PXD023022
DR   PRIDE; PXD028534
DR   PRIDE; PXD036285
DR   Wikidata; Q127383960
RX   PubMed=17947977;
RX   PubMed=21720954;
RX   PubMed=24453163;
RX   PubMed=25521792;
RX   PubMed=26187819;
RX   PubMed=30833711;
RX   PubMed=31578252;
RX   PubMed=35258835;
RX   PubMed=35657526;
WW   https://abrc.osu.edu/stocks/282
CC   Group: Plant cell line.
CC   Characteristics: Grown in darkness (ABRC).
CC   Characteristics: Can be genetically transformed with Agrobacterium (PubMed=35258835).
CC   Characteristics: Can be used to prepare protoplasts (PubMed=17947977).
CC   Omics: Deep phosphoproteome analysis.
CC   Omics: Deep proteome analysis.
CC   Omics: S-sulfenylation analysis by proteomics.
CC   Omics: Transcriptome analysis by microarray.
CC   Omics: Transcriptome analysis by RNAseq.
CC   Derived from site: In situ; Stem; PO=PO_0009047.
CC   Breed/subspecies: Cultivar Landsberg erecta.
OX   NCBI_TaxID=3702; ! Arabidopsis thaliana (Mouse-ear cress)
HI   CVCL_D5GY ! MM2d
CA   Spontaneously immortalized cell line
DT   Created: 02-05-24; Last updated: 10-09-24; Version: 2
//
RX   PubMed=17947977; DOI=10.1038/nprot.2007.360;
RA   Miao Y.-S., Jiang L.-W.;
RT   "Transient expression of fluorescent fusion proteins in protoplasts of
RT   suspension cultured cells.";
RL   Nat. Protoc. 2:2348-2353(2007).
//
RX   PubMed=21720954; DOI=10.1007/978-1-61779-154-3_11;
RA   Van Leene J., Eeckhout D., Persiau G., Van De Slijke E., Geerinck J.,
RA   Van Isterdael G., Witters E., De Jaeger G.;
RT   "Isolation of transcription factor complexes from Arabidopsis cell
RT   suspension cultures by tandem affinity purification.";
RL   Methods Mol. Biol. 754:195-218(2011).
//
RX   PubMed=24453163; DOI=10.1104/pp.113.229617; PMCID=PMC3938607;
RA   Verkest A., Abeel T., Heyndrickx K.S., Van Leene J., Lanz C.,
RA   Van De Slijke E., De Winne N., Eeckhout D., Persiau G.,
RA   Van Breusegem F., Inze D., Vandepoele K., De Jaeger G.;
RT   "A generic tool for transcription factor target gene discovery in
RT   Arabidopsis cell suspension cultures based on tandem chromatin
RT   affinity purification.";
RL   Plant Physiol. 164:1122-1133(2014).
//
RX   PubMed=25521792; DOI=10.1038/nprot.2014.199;
RA   Van Leene J., Eeckhout D., Cannoot B., De Winne N., Persiau G.,
RA   Van De Slijke E., Vercruysse L., Dedecker M., Verkest A.,
RA   Vandepoele K., Martens L., Witters E., Gevaert K., De Jaeger G.;
RT   "An improved toolbox to unravel the plant cellular machinery by tandem
RT   affinity purification of Arabidopsis protein complexes.";
RL   Nat. Protoc. 10:169-187(2015).
//
RX   PubMed=26187819; DOI=10.1186/s12864-015-1753-4; PMCID=PMC4506601;
RA   Lin L.-L., Hsu C.-L., Hu C.-W., Ko S.-Y., Hsieh H.-L., Huang H.-C.,
RA   Juan H.-F.;
RT   "Integrating phosphoproteomics and bioinformatics to study
RT   brassinosteroid-regulated phosphorylation dynamics in Arabidopsis.";
RL   BMC Genomics 16:533.1-533.17(2015).
//
RX   PubMed=30833711; DOI=10.1038/s41477-019-0378-z;
RA   Van Leene J., Han C., Gadeyne A., Eeckhout D., Matthijs C.,
RA   Cannoot B., De Winne N., Persiau G., Van De Slijke E.,
RA   Van de Cotte B., Stes E., Van Bel M., Storme V., Impens F.,
RA   Gevaert K., Vandepoele K., De Smet I., De Jaeger G.;
RT   "Capturing the phosphorylation and protein interaction landscape of
RT   the plant TOR kinase.";
RL   Nat. Plants 5:316-327(2019).
//
RX   PubMed=31578252; DOI=10.1073/pnas.1906768116; PMCID=PMC6800386;
RA   Huang J.-J., Willems P., Wei B., Tian C.-P., Ferreira R.B., Bodra N.,
RA   Martinez Gache S.A., Wahni K., Liu K., Vertommen D., Gevaert K.,
RA   Carroll K.S., Van Montagu M.C.E., Yang J., Van Breusegem F.,
RA   Messens J.;
RT   "Mining for protein S-sulfenylation in Arabidopsis uncovers
RT   redox-sensitive sites.";
RL   Proc. Natl. Acad. Sci. U.S.A. 116:21256-21261(2019).
//
RX   PubMed=35258835; DOI=10.1007/978-1-0716-2164-6_15;
RA   Decaestecker W., Bollier N., Buono R.A., Nowack M.K., Jacobs T.B.;
RT   "Protoplast preparation and fluorescence-activated cell sorting for
RT   the evaluation of targeted mutagenesis in plant cells.";
RL   Methods Mol. Biol. 2464:205-221(2022).
//
RX   PubMed=35657526; DOI=10.1007/978-1-0716-2469-2_19;
RA   Zhang Z.-C., Timmerman E., Impens F., Van Breusegem F.;
RT   "Characterization of RBPome in oxidative stress conditions.";
RL   Methods Mol. Biol. 2526:259-275(2022).
//