ID   PSB-D
AC   CVCL_D5H0
SY   PSBD
DR   ArrayExpress; E-MTAB-3019
DR   ArrayExpress; E-MTAB-3046
DR   ArrayExpress; E-MTAB-3754
DR   ArrayExpress; E-MTAB-3915
DR   ArrayExpress; E-MTAB-6513
DR   ArrayExpress; E-MTAB-7761
DR   GEO; GSE48793
DR   GEO; GSE53422
DR   PRIDE; PXD001473
DR   PRIDE; PXD001562
DR   PRIDE; PXD008355
DR   PRIDE; PXD023022
DR   PRIDE; PXD028534
DR   PRIDE; PXD036285
DR   Wikidata; Q127383960
RX   PubMed=17947977;
RX   PubMed=21720954;
RX   PubMed=24453163;
RX   PubMed=25521792;
RX   PubMed=26187819;
RX   PubMed=30833711;
RX   PubMed=31578252;
RX   PubMed=35258835;
RX   PubMed=35657526;
WW   Provider; ABRC; CCL84840; https://abrc.osu.edu/stocks/282
CC   Group: Plant cell line.
CC   Characteristics: Grown in darkness (ABRC).
CC   Characteristics: Can be genetically transformed with Agrobacterium (PubMed=35258835).
CC   Characteristics: Can be used to prepare protoplasts (PubMed=17947977).
CC   Omics: Proteomics.
CC   Omics: Proteomics; PTM; Phosphorylation.
CC   Omics: Proteomics; PTM; S-sulfenylation.
CC   Omics: Transcriptomics; Microarray.
CC   Omics: Transcriptomics; RNAseq.
CC   Derived from site: In situ; Stem; PO=PO_0009047.
CC   Breed/subspecies: Cultivar Landsberg erecta.
OX   NCBI_TaxID=3702; ! Arabidopsis thaliana (Mouse-ear cress)
HI   CVCL_D5GY ! MM2d
CA   Spontaneously immortalized cell line
DT   Created: 02-05-24; Last updated: 10-04-25; Version: 3
//
RX   PubMed=21720954; DOI=10.1007/978-1-61779-154-3_11;
RA   Van Leene, Jelle
RA   Eeckhout, Dominique
RA   Persiau, Geert
RA   Van De Slijke, Eveline
RA   Geerinck, Jan
RA   Van Isterdael, Gert
RA   Witters, Erwin
RA   De Jaeger, Geert
RT   "Isolation of transcription factor complexes from Arabidopsis cell
RT   suspension cultures by tandem affinity purification.";
RL   Methods Mol. Biol. 754:195-218(2011).
//
RX   PubMed=17947977; DOI=10.1038/nprot.2007.360;
RA   Miao, Yan-Song
RA   Jiang, Li-Wen
RT   "Transient expression of fluorescent fusion proteins in protoplasts of
RT   suspension cultured cells.";
RL   Nat. Protoc. 2:2348-2353(2007).
//
RX   PubMed=35657526; DOI=10.1007/978-1-0716-2469-2_19;
RA   Zhang, Zhi-Cheng
RA   Timmerman, Evy
RA   Impens, Francis
RA   Van Breusegem, Frank
RT   "Characterization of RBPome in oxidative stress conditions.";
RL   Methods Mol. Biol. 2526:259-275(2022).
//
RX   PubMed=31578252; DOI=10.1073/pnas.1906768116; PMCID=PMC6800386;
RA   Huang, Jing-Jing
RA   Willems, Patrick
RA   Wei, Bo
RA   Tian, Cai-Ping
RA   Ferreira, Renan B.
RA   Bodra, Nandita
RA   Martinez Gache, Santiago Agustin
RA   Wahni, Khadija
RA   Liu, Keke
RA   Vertommen, Didier
RA   Gevaert, Kris
RA   Carroll, Kate S.
RA   Van Montagu, Marc C.E.
RA   Yang, Jing
RA   Van Breusegem, Frank
RA   Messens, Joris
RT   "Mining for protein S-sulfenylation in Arabidopsis uncovers
RT   redox-sensitive sites.";
RL   Proc. Natl. Acad. Sci. U.S.A. 116:21256-21261(2019).
//
RX   PubMed=24453163; DOI=10.1104/pp.113.229617; PMCID=PMC3938607;
RA   Verkest, Aurine
RA   Abeel, Thomas
RA   Heyndrickx, Ken S.
RA   Van Leene, Jelle
RA   Lanz, Christa
RA   Van De Slijke, Eveline
RA   De Winne, Nancy
RA   Eeckhout, Dominique
RA   Persiau, Geert
RA   Van Breusegem, Frank
RA   Inze, Dirk
RA   Vandepoele, Klaas
RA   De Jaeger, Geert
RT   "A generic tool for transcription factor target gene discovery in
RT   Arabidopsis cell suspension cultures based on tandem chromatin
RT   affinity purification.";
RL   Plant Physiol. 164:1122-1133(2014).
//
RX   PubMed=35258835; DOI=10.1007/978-1-0716-2164-6_15;
RA   Decaestecker, Ward
RA   Bollier, Norbert
RA   Buono, Rafael Andrade
RA   Nowack, Moritz K.
RA   Jacobs, Thomas B.
RT   "Protoplast preparation and fluorescence-activated cell sorting for
RT   the evaluation of targeted mutagenesis in plant cells.";
RL   Methods Mol. Biol. 2464:205-221(2022).
//
RX   PubMed=30833711; DOI=10.1038/s41477-019-0378-z;
RA   Van Leene, Jelle
RA   Han, Chao
RA   Gadeyne, Astrid
RA   Eeckhout, Dominique
RA   Matthijs, Caroline
RA   Cannoot, Bernard
RA   De Winne, Nancy
RA   Persiau, Geert
RA   Van De Slijke, Eveline
RA   Van de Cotte, Brigitte
RA   Stes, Elisabeth
RA   Van Bel, Michiel
RA   Storme, Veronique
RA   Impens, Francis
RA   Gevaert, Kris
RA   Vandepoele, Klaas
RA   De Smet, Ive
RA   De Jaeger, Geert
RT   "Capturing the phosphorylation and protein interaction landscape of
RT   the plant TOR kinase.";
RL   Nat. Plants 5:316-327(2019).
//
RX   PubMed=25521792; DOI=10.1038/nprot.2014.199;
RA   Van Leene, Jelle
RA   Eeckhout, Dominique
RA   Cannoot, Bernard
RA   De Winne, Nancy
RA   Persiau, Geert
RA   Van De Slijke, Eveline
RA   Vercruysse, Leen
RA   Dedecker, Maarten
RA   Verkest, Aurine
RA   Vandepoele, Klaas
RA   Martens, Lennart
RA   Witters, Erwin
RA   Gevaert, Kris
RA   De Jaeger, Geert
RT   "An improved toolbox to unravel the plant cellular machinery by tandem
RT   affinity purification of Arabidopsis protein complexes.";
RL   Nat. Protoc. 10:169-187(2015).
//
RX   PubMed=26187819; DOI=10.1186/s12864-015-1753-4; PMCID=PMC4506601;
RA   Lin, Li-Ling
RA   Hsu, Chia-Lang
RA   Hu, Chia-Wei
RA   Ko, Shiao-Yun
RA   Hsieh, Hsu-Liang
RA   Huang, Hsuan-Cheng
RA   Juan, Hsueh-Fen
RT   "Integrating phosphoproteomics and bioinformatics to study
RT   brassinosteroid-regulated phosphorylation dynamics in Arabidopsis.";
RL   BMC Genomics 16:533.1-533.17(2015).
//