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Cellosaurus PGPC14_26 (CVCL_B5ND)

[Text version]
Cell line name PGPC14_26
Synonyms Personal Genome Project Canada 14 clone 26
Accession CVCL_B5ND
Resource Identification Initiative To cite this cell line use: PGPC14_26 (RRID:CVCL_B5ND)
Comments Population: Caucasian.
Omics: Genome sequenced.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Sequence variations
  • Mutation; HGNC; HGNC:25491; FRMD4A; Simple; c.563+1G>T; Zygosity=Heterozygous; Note=Splice donor mutation (PubMed=31813827).
  • Mutation; HGNC; HGNC:6242; KCNE2; Simple; p.Thr10Met (c.29C>T); Zygosity=Heterozygous (from inference of genome of donor).
  • Mutation; HGNC; HGNC:11998; TP53; Simple; p.Arg158His (c.473G>A); ClinVar=VCV000141963; Zygosity=Heterozygous (PubMed=31813827).
  • Mutation; HGNC; HGNC:32669; TRIM71; Simple; p.Arg655Ter (c.1963C>T); Zygosity=Heterozygous (PubMed=31813827).
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_B5NC ! PGPC14_16
CVCL_B5NE ! PGPC14_70
CVCL_B5NF ! PGPC14_94
Sex of cell Female
Age at sampling 62Y
Category Induced pluripotent stem cell
Publications

PubMed=31813827; DOI=10.1016/j.stemcr.2019.11.003; PMCID=PMC6915802
Hildebrandt M.R., Reuter M.S., Wei W., Tayebi N., Liu J.-J., Sharmin S., Mulder J., Lesperance L.S., Brauer P.M., Mok R.S.-F., Kinnear C., Piekna A., Romm A., Howe J., Pasceri P., Meng G.-L., Rozycki M., Rodrigues D.C., Martinez E.C., Szego M.J., Zuniga-Pflucker J.C., Anderson M.K., Prescott S.A., Rosenblum N.D., Kamath B.M., Mital S., Scherer S.W., Ellis J.
Precision health resource of control iPSC lines for versatile multilineage differentiation.
Stem Cell Reports 13:1126-1141(2019)

Cross-references
Encyclopedic resources Wikidata; Q112129509
Gene expression databases GEO; GSM3834428
Sequence databases EGA; EGAS00001003684
Entry history
Entry creation17-Mar-2022
Last entry update19-Dec-2024
Version number5