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Cellosaurus UCB0164 (CVCL_B4XR)

[Text version]
Cell line name UCB0164
Accession CVCL_B4XR
Resource Identification Initiative To cite this cell line use: UCB0164 (RRID:CVCL_B4XR)
Comments Part of: GenCord collection.
Population: Caucasian.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: H3K27ac ChIP-seq epigenome analysis.
Omics: H3K4me1 ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Umbilical cord blood; UBERON=UBERON_0012168.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_B4RU ! UCF0164
CVCL_B4XS ! UCT0164
Sex of cell Female
Age at sampling <1D
Category Transformed cell line
Publications

PubMed=19644074; DOI=10.1126/science.1174148; PMCID=PMC2867218
Dimas A.S., Deutsch S., Stranger B.E., Montgomery S.B., Borel C., Attar-Cohen H., Ingle C., Beazley C., Gutierrez-Arcelus M., Sekowska M., Gagnebin M., Nisbett J., Deloukas P., Dermitzakis E.T., Antonarakis S.E.
Common regulatory variation impacts gene expression in a cell type-dependent manner.
Science 325:1246-1250(2009)

PubMed=31048460; DOI=10.1126/science.aat8266
Delaneau O., Zazhytska M., Borel C., Giannuzzi G., Rey G., Howald C., Kumar S., Ongen H., Popadin K.Y., Marbach D., Ambrosini G., Bielser D., Hacker D.L., Romano L., Ribaux P., Wiederkehr M., Falconnet E., Bucher P., Bergmann S., Antonarakis S.E., Reymond A., Dermitzakis E.T.
Chromatin three-dimensional interactions mediate genetic effects on gene expression.
Science 364:eaat8266.1-eaat8266.10(2019)

Cross-references
Encyclopedic resources Wikidata; Q110433376
Gene expression databases GEO; GSM431801
Sequence databases EGA; EGAS00001003485
Entry history
Entry creation16-Dec-2021
Last entry update30-Jan-2024
Version number5