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Cellosaurus HeLa-SHMT2-shSHMT2 (CVCL_A1AR)

[Text version]
Cell line name HeLa-SHMT2-shSHMT2
Synonyms HeLa-Ss
Accession CVCL_A1AR
Resource Identification Initiative To cite this cell line use: HeLa-SHMT2-shSHMT2 (RRID:CVCL_A1AR)
Comments Population: African American.
Characteristics: Allows both a Tet-inducible over-expression of mouse Shmt2 and isopropyl beta-D-1-thiogalactopyranoside (IPTG)-inducible shRNA against SHMT2.
Knockout cell: Method=shRNA knockdown; HGNC; 10852; SHMT2.
Genetic integration: Method=Transfection/transduction; Gene=MGI; MGI:1277989; Shmt2.
Genetic integration: Method=Transfection/transduction; Gene=UniProtKB; P13249; S.alboniger pac (PuroR).
Genetic integration: Method=Transfection/transduction; Gene=UniProtKB; P00557; Escherichia coli hygromycin-B 4-O-kinase (hph) (HygR).
Genetic integration: Method=Transfection/transduction; Gene=UniProtKB; P04483; Escherichia coli Tn10 tetR.
Transformant: NCBI_TaxID; 333761; Human papillomavirus type 18 (HPV18).
Derived from site: In situ; Uterus, cervix; UBERON=UBERON_0000002.
Disease Human papillomavirus-related cervical adenocarcinoma (NCIt: C27677)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_D587 (T-REx-HeLa)
Sex of cell Female
Age at sampling 30Y6M
Category Cancer cell line
Publications

PubMed=32903271; DOI=10.1371/journal.pone.0237981; PMCID=PMC7480864
Tong J.-F., Krieger J.R., Taylor P., Bagshaw R., Kang J., Jeedigunta S., Wybenga-Groot L.E., Zhang W., Badr H., Mirhadi S., Pham N.-A., Coyaud E., Yu M., Li M., Cabanero M., Raught B., Maynes J.T., Hawkins C., Tsao M.-S., Moran M.F.
Cancer proteome and metabolite changes linked to SHMT2.
PLoS ONE 15:E0237981-E0237981(2020)

Cross-references
Encyclopedic resources Wikidata; Q102114111
Metabolomic databases MetaboLights; MTBLS405
Proteomic databases PRIDE; PXD004629
PRIDE; PXD004954
Entry history
Entry creation29-Oct-2020
Last entry update10-Sep-2024
Version number8