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Cellosaurus YCCEL1 (CVCL_9647)

[Text version]
Cell line name YCCEL1
Synonyms YCC-10; YCC10
Accession CVCL_9647
Secondary accession CVCL_L440
Resource Identification Initiative To cite this cell line use: YCCEL1 (RRID:CVCL_9647)
Comments From: Yonsei Cancer Center; Seoul; South Korea.
Population: Korean.
Virology: Contains a complete EBV genome (strain YCCEL1) which has been sequenced (PubMed=25787276; PubMed=26889033).
Doubling time: 50 hours (PubMed=29435981).
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Deep exome analysis.
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Derived from site: Metastatic; Ascites; UBERON=UBERON_0007795.
Sequence variations
  • Mutation; HGNC; HGNC:7029; MET; Simple; p.His58Leu; Zygosity=Unspecified (PubMed=29435981).
Disease Gastric adenocarcinoma (NCIt: C4004)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 64Y
Category Cancer cell line
Publications

PubMed=18804159; DOI=10.1016/j.ygeno.2008.08.002
Jung J.-J., Jeung H.-C., Chung H.C., Lee J.O., Kim T.S., Kim Y.T., Noh S.H., Rha S.Y.
In vitro pharmacogenomic database and chemosensitivity predictive genes in gastric cancer.
Genomics 93:52-61(2009)

PubMed=23175241; DOI=10.1099/vir.0.045237-0
Kim D.N., Seo M.K., Choi H., Kim S.Y., Shin H.J., Yoon A.-R., Tao Q., Rha S.Y., Lee S.K.
Characterization of naturally Epstein-Barr virus-infected gastric carcinoma cell line YCCEL1.
J. Gen. Virol. 94:497-506(2013)

PubMed=25787276; DOI=10.1128/JVI.03614-14; PMCID=PMC4442510
Palser A.L., Grayson N.E., White R.E., Corton C., Correia S., Ba Abdullah M.M., Watson S.J., Cotten M., Arrand J.R., Murray P.G., Allday M.J., Rickinson A.B., Young L.S., Farrell P.J., Kellam P.
Genome diversity of Epstein-Barr virus from multiple tumor types and normal infection.
J. Virol. 89:5222-5237(2015)

DOI=10.1158/1538-7445.AM2016-139
Kim T.S., Park K.H., Kwon W.S., Lee W.S., Jeong I., Kang S.K., Kim H.M., Rha S.Y., Chung H.C.
Novel gastric cancer cell lines established from diffuse type gastric cancer patients for potential subgroup-specific therapy.
Cancer Res. 76 Suppl. 14:139-139(2016)

PubMed=26889033; DOI=10.1128/JVI.00060-16; PMCID=PMC4836357
Kanda T., Furuse Y., Oshitani H., Kiyono T.
Highly efficient CRISPR/Cas9-mediated cloning and functional characterization of gastric cancer-derived Epstein-Barr virus strains.
J. Virol. 90:4383-4393(2016)

PubMed=29435981; DOI=10.1002/ijc.31304
Kim H.J., Kang S.K., Kwon W.S., Kim T.S., Jeong I., Jeung H.-C., Kragh M., Horak I.D., Chung H.C., Rha S.Y.
Forty-nine gastric cancer cell lines with integrative genomic profiling for development of c-MET inhibitor.
Int. J. Cancer 143:151-159(2018)

Cross-references
Cell line databases/resources cancercelllines; CVCL_9647
Encyclopedic resources Wikidata; Q54995318
Experimental variables resources EFO; EFO_0002877
Gene expression databases GEO; GSM552379
GEO; GSM562399
Polymorphism and mutation databases Progenetix; CVCL_9647
Entry history
Entry creation06-Jun-2012
Last entry update19-Dec-2024
Version number14