Cellosaurus GM19240 (CVCL_9635)
Cell line name | GM19240 | ||||||||||||||||||||
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Accession | CVCL_9635 | ||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: GM19240 (RRID:CVCL_9635) | ||||||||||||||||||||
Comments | Part of: ENCODE project common cell types; tier 3. Part of: Genetic Testing Reference Material (GeT-RM) samples. Part of: International Genome Sample Resource (1000 genomes project) cell lines. Population: African; Yoruba in Ibadan, Nigeria (YRI). Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV). Omics: CNV analysis. Omics: Deep exome analysis. Omics: Deep proteome analysis. Omics: DNA methylation analysis. Omics: Genome sequenced. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178. | ||||||||||||||||||||
HLA typing | Source: PubMed=27792722
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Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||
Sex of cell | Female | ||||||||||||||||||||
Age at sampling | Age unspecified | ||||||||||||||||||||
Category | Transformed cell line | ||||||||||||||||||||
Web pages | http://genome.ucsc.edu/ENCODE/protocols/cell/human/GM19240_Crawford_protocol.pdf http://www.completegenomics.com/documents/PublicGenomes.pdf https://www.ncbi.nlm.nih.gov/variation/tools/get-rm/ | ||||||||||||||||||||
Publications | PubMed=17122850; DOI=10.1038/nature05329; PMCID=PMC2669898 PubMed=19043577; DOI=10.1371/journal.pgen.1000287; PMCID=PMC2583954 PubMed=21397061; DOI=10.1016/j.ajhg.2011.02.004; PMCID=PMC3059424 PubMed=21418647; DOI=10.1186/gb-2011-12-3-r25; PMCID=PMC3129675 PubMed=23325432; DOI=10.1101/gr.147942.112; PMCID=PMC3589544 PubMed=23676674; DOI=10.1038/nature12223; PMCID=PMC3789121 PubMed=27792722; DOI=10.1371/journal.pcbi.1005151; PMCID=PMC5085092 | ||||||||||||||||||||
Cross-references | |||||||||||||||||||||
Cell line collections (Providers) | Coriell; GM19240 | ||||||||||||||||||||
Cell line databases/resources | CLO; CLO_0027143 | ||||||||||||||||||||
Biological sample resources | 4DN; 4DNSRWYYID1N
ENCODE; ENCBS338PQB ENCODE; ENCBS510ENC ENCODE; ENCBS760NLE IGSR; NA19240 | ||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54850325 | ||||||||||||||||||||
Experimental variables resources | EFO; EFO_0002790 | ||||||||||||||||||||
Gene expression databases | GEO; GSM112758
GEO; GSM188772 GEO; GSM291940 GEO; GSM489284 GEO; GSM489285 GEO; GSM489297 GEO; GSM489298 GEO; GSM649269 GEO; GSM651108 GEO; GSM651109 GEO; GSM816648 GEO; GSM1720167 | ||||||||||||||||||||
Entry history | |||||||||||||||||||||
Entry creation | 06-Jun-2012 | ||||||||||||||||||||
Last entry update | 29-Jun-2023 | ||||||||||||||||||||
Version number | 23 |