Cellosaurus GM19239 (CVCL_9634)
Cell line name | GM19239 | ||||||||||||||||||||
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Accession | CVCL_9634 | ||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: GM19239 (RRID:CVCL_9634) | ||||||||||||||||||||
Comments | Part of: ENCODE project common cell types; tier 3. Part of: International Genome Sample Resource (1000 genomes project) cell lines. Population: African; Yoruba in Ibadan, Nigeria (YRI). Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV). Omics: CNV analysis. Omics: Deep proteome analysis. Omics: DNA methylation analysis. Omics: Genome sequenced. Omics: H3K27ac ChIP-seq epigenome analysis. Omics: H3K27me3 ChIP-seq epigenome analysis. Omics: H3K4me1 ChIP-seq epigenome analysis. Omics: H3K4me3 ChIP-seq epigenome analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178. | ||||||||||||||||||||
HLA typing | Source: PubMed=27792722
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Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||
Sex of cell | Male | ||||||||||||||||||||
Age at sampling | Age unspecified | ||||||||||||||||||||
Category | Transformed cell line | ||||||||||||||||||||
Web pages | http://genome.ucsc.edu/ENCODE/protocols/cell/human/GM19239_Crawford_protocol.pdf http://www.completegenomics.com/documents/PublicGenomes.pdf | ||||||||||||||||||||
Publications | PubMed=17122850; DOI=10.1038/nature05329; PMCID=PMC2669898 PubMed=19043577; DOI=10.1371/journal.pgen.1000287; PMCID=PMC2583954 PubMed=19797678; DOI=10.1101/gr.097600.109; PMCID=PMC2775589 PubMed=20220758; DOI=10.1038/nature08872; PMCID=PMC3089435 PubMed=21397061; DOI=10.1016/j.ajhg.2011.02.004; PMCID=PMC3059424 PubMed=21418647; DOI=10.1186/gb-2011-12-3-r25; PMCID=PMC3129675 PubMed=22797897; DOI=10.1073/pnas.1205199109; PMCID=PMC3411951 PubMed=23325432; DOI=10.1101/gr.147942.112; PMCID=PMC3589544 PubMed=23676674; DOI=10.1038/nature12223; PMCID=PMC3789121 PubMed=24136359; DOI=10.1126/science.1242429; PMCID=PMC3947669 PubMed=25468404; DOI=10.1186/s13059-014-0547-3; PMCID=PMC4290387 PubMed=26621101; DOI=10.1016/j.jmoldx.2015.08.005; PMCID=PMC4695224 PubMed=27792722; DOI=10.1371/journal.pcbi.1005151; PMCID=PMC5085092 PubMed=29474986; DOI=10.1016/j.jmoldx.2018.01.011 | ||||||||||||||||||||
Cross-references | |||||||||||||||||||||
Cell line collections (Providers) | Coriell; GM19239 | ||||||||||||||||||||
Cell line databases/resources | CLO; CLO_0027144 | ||||||||||||||||||||
Biological sample resources | 4DN; 4DNSRKH549U5
ENCODE; ENCBS385ENC ENCODE; ENCBS513JGI ENCODE; ENCBS657HMS IGSR; NA19239 | ||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54850324 | ||||||||||||||||||||
Experimental variables resources | EFO; EFO_0002789 | ||||||||||||||||||||
Gene expression databases | GEO; GSM112757
GEO; GSM188771 GEO; GSM273514 GEO; GSM291939 GEO; GSM315201 GEO; GSM485378 GEO; GSM485414 GEO; GSM489288 GEO; GSM489289 GEO; GSM489301 GEO; GSM489302 GEO; GSM649315 GEO; GSM651188 GEO; GSM651189 GEO; GSM816659 GEO; GSM1164212 GEO; GSM1164222 GEO; GSM1164232 GEO; GSM1164242 GEO; GSM1164252 GEO; GSM1720166 | ||||||||||||||||||||
Entry history | |||||||||||||||||||||
Entry creation | 06-Jun-2012 | ||||||||||||||||||||
Last entry update | 30-Jan-2024 | ||||||||||||||||||||
Version number | 26 |