Cellosaurus GM19238 (CVCL_9633)
Cell line name | GM19238 | ||||||||||||||||||||
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Accession | CVCL_9633 | ||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: GM19238 (RRID:CVCL_9633) | ||||||||||||||||||||
Comments | Part of: ENCODE project common cell types; tier 3. Part of: International Genome Sample Resource (1000 genomes project) cell lines. Population: African; Yoruba in Ibadan, Nigeria (YRI). Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV). Omics: CNV analysis. Omics: Deep proteome analysis. Omics: Genome sequenced. Omics: H3K27ac ChIP-seq epigenome analysis. Omics: H3K27me3 ChIP-seq epigenome analysis. Omics: H3K4me1 ChIP-seq epigenome analysis. Omics: H3K4me3 ChIP-seq epigenome analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178. | ||||||||||||||||||||
HLA typing | Source: PubMed=27792722
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Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||
Sex of cell | Female | ||||||||||||||||||||
Age at sampling | Age unspecified | ||||||||||||||||||||
Category | Transformed cell line | ||||||||||||||||||||
Web pages | http://genome.ucsc.edu/ENCODE/protocols/cell/human/GM19238_Crawford_protocol.pdf http://www.completegenomics.com/documents/PublicGenomes.pdf | ||||||||||||||||||||
Publications | PubMed=17122850; DOI=10.1038/nature05329; PMCID=PMC2669898 PubMed=19043577; DOI=10.1371/journal.pgen.1000287; PMCID=PMC2583954 PubMed=19797678; DOI=10.1101/gr.097600.109; PMCID=PMC2775589 PubMed=20220758; DOI=10.1038/nature08872; PMCID=PMC3089435 PubMed=21418647; DOI=10.1186/gb-2011-12-3-r25; PMCID=PMC3129675 PubMed=22797897; DOI=10.1073/pnas.1205199109; PMCID=PMC3411951 PubMed=23676674; DOI=10.1038/nature12223; PMCID=PMC3789121 PubMed=24136359; DOI=10.1126/science.1242429; PMCID=PMC3947669 PubMed=25468404; DOI=10.1186/s13059-014-0547-3; PMCID=PMC4290387 PubMed=26621101; DOI=10.1016/j.jmoldx.2015.08.005; PMCID=PMC4695224 PubMed=27792722; DOI=10.1371/journal.pcbi.1005151; PMCID=PMC5085092 | ||||||||||||||||||||
Cross-references | |||||||||||||||||||||
Cell line collections (Providers) | Coriell; GM19238 | ||||||||||||||||||||
Cell line databases/resources | CLO; CLO_0027146 | ||||||||||||||||||||
Biological sample resources | 4DN; 4DNSRE31VFYQ
ENCODE; ENCBS332FBI ENCODE; ENCBS509ENC ENCODE; ENCBS594JOC IGSR; NA19238 | ||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54850323 | ||||||||||||||||||||
Experimental variables resources | EFO; EFO_0002788 | ||||||||||||||||||||
Gene expression databases | GEO; GSM112756
GEO; GSM188770 GEO; GSM273513 GEO; GSM291938 GEO; GSM315200 GEO; GSM485377 GEO; GSM485413 GEO; GSM489286 GEO; GSM489287 GEO; GSM489299 GEO; GSM489300 GEO; GSM651190 GEO; GSM651191 GEO; GSM816658 GEO; GSM1164211 GEO; GSM1164221 GEO; GSM1164231 GEO; GSM1164241 GEO; GSM1164251 GEO; GSM1204881 GEO; GSM1720165 | ||||||||||||||||||||
Entry history | |||||||||||||||||||||
Entry creation | 06-Jun-2012 | ||||||||||||||||||||
Last entry update | 30-Jan-2024 | ||||||||||||||||||||
Version number | 25 |