ID   GM18507
AC   CVCL_9632
DR   CLO; CLO_0024916
DR   EFO; EFO_0002787
DR   Coriell; GM18507
DR   ENCODE; ENCBS222AAA
DR   GEO; GSM112578
DR   GEO; GSM112882
DR   GEO; GSM188858
DR   GEO; GSM273459
DR   GEO; GSM291714
DR   GEO; GSM315146
DR   GEO; GSM485464
DR   GEO; GSM485428
DR   GEO; GSM649268
DR   GEO; GSM816653
DR   GEO; GSM1164204
DR   GEO; GSM1164214
DR   GEO; GSM1164224
DR   GEO; GSM1164234
DR   GEO; GSM1164244
DR   GEO; GSM1204877
DR   GEO; GSM1618715
DR   GEO; GSM1719847
DR   IGSR; NA18507
DR   PRIDE; PXD000419
DR   PRIDE; PXD001406
DR   Wikidata; Q54849585
RX   PubMed=17122850;
RX   PubMed=19043577;
RX   PubMed=19797678;
RX   PubMed=20220758;
RX   PubMed=21397061;
RX   PubMed=22797897;
RX   PubMed=23676674;
RX   PubMed=24136357;
RX   PubMed=24136359;
RX   PubMed=25468404;
WW   http://genome.ucsc.edu/ENCODE/protocols/cell/human/GM18507_protocol.pdf
CC   Part of: ENCODE project common cell types; tier 3.
CC   Part of: International Genome Sample Resource (1000 genomes project) cell lines.
CC   Population: African; Yoruba in Ibadan, Nigeria (YRI).
CC   Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
CC   Omics: CNV analysis.
CC   Omics: Deep proteome analysis.
CC   Omics: DNA methylation analysis.
CC   Omics: Genome sequenced.
CC   Omics: H3K27ac ChIP-seq epigenome analysis.
CC   Omics: H3K27me3 ChIP-seq epigenome analysis.
CC   Omics: H3K4me1 ChIP-seq epigenome analysis.
CC   Omics: H3K4me3 ChIP-seq epigenome analysis.
CC   Omics: Transcriptome analysis by microarray.
CC   Omics: Transcriptome analysis by RNAseq.
CC   Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
OX   NCBI_TaxID=9606; ! Homo sapiens (Human)
SX   Male
AG   Age unspecified
CA   Transformed cell line
DT   Created: 06-06-12; Last updated: 30-01-24; Version: 23
//
RX   PubMed=17122850; DOI=10.1038/nature05329;
RA   Redon R., Ishikawa S., Fitch K.R., Feuk L., Perry G.H., Andrews T.D.,
RA   Fiegler H., Shapero M.H., Carson A.R., Chen W.-W., Cho E.K., Dallaire S.,
RA   Freeman J.L., Gonzalez J.R., Gratacos M., Huang J., Kalaitzopoulos D.,
RA   Komura D., MacDonald J.R., Marshall C.R., Mei R., Montgomery L.,
RA   Nishimura K., Okamura K., Shen F., Somerville M.J., Tchinda J.,
RA   Valsesia A., Woodwark C., Yang F.-T., Zhang J.-J., Zerjal T., Zhang J.,
RA   Armengol L., Conrad D.F., Estivill X., Tyler-Smith C., Carter N.P.,
RA   Aburatani H., Lee C., Jones K.W., Scherer S.W., Hurles M.E.;
RT   "Global variation in copy number in the human genome.";
RL   Nature 444:444-454(2006).
//
RX   PubMed=19043577; DOI=10.1371/journal.pgen.1000287;
RA   Choy E., Yelensky R., Bonakdar S., Plenge R.M., Saxena R.,
RA   De Jager P.L., Shaw S.Y., Wolfish C.S., Slavik J.M., Cotsapas C.,
RA   Rivas M.A., Dermitzakis E.T., Cahir-McFarland E., Kieff E.D.,
RA   Hafler D.A., Daly M.J., Altshuler D.M.;
RT   "Genetic analysis of human traits in vitro: drug response and gene
RT   expression in lymphoblastoid cell lines.";
RL   PLoS Genet. 4:E1000287-E1000287(2008).
//
RX   PubMed=19797678; DOI=10.1101/gr.097600.109;
RA   Nayak R.R., Kearns M., Spielman R.S., Cheung V.G.;
RT   "Coexpression network based on natural variation in human gene
RT   expression reveals gene interactions and functions.";
RL   Genome Res. 19:1953-1962(2009).
//
RX   PubMed=20220758; DOI=10.1038/nature08872;
RA   Pickrell J.K., Marioni J.C., Pai A.A., Degner J.F., Engelhardt B.E.,
RA   Nkadori E., Veyrieras J.-B., Stephens M., Gilad Y., Pritchard J.K.;
RT   "Understanding mechanisms underlying human gene expression variation
RT   with RNA sequencing.";
RL   Nature 464:768-772(2010).
//
RX   PubMed=21397061; DOI=10.1016/j.ajhg.2011.02.004;
RA   Campbell C.D., Sampas N., Tsalenko A., Sudmant P.H., Kidd J.M.,
RA   Malig M., Vu T.H., Vives L., Tsang P., Bruhn L., Eichler E.E.;
RT   "Population-genetic properties of differentiated human copy-number
RT   polymorphisms.";
RL   Am. J. Hum. Genet. 88:317-332(2011).
//
RX   PubMed=22797897; DOI=10.1073/pnas.1205199109;
RA   Iskow R.C., Gokcumen O., Abyzov A., Malukiewicz J., Zhu Q.-H.,
RA   Sukumar A.T., Pai A.A., Mills R.E., Habegger L., Cusanovich D.A.,
RA   Rubel M.A., Perry G.H., Gerstein M.B., Stone A.C., Gilad Y., Lee C.;
RT   "Regulatory element copy number differences shape primate expression
RT   profiles.";
RL   Proc. Natl. Acad. Sci. U.S.A. 109:12656-12661(2012).
//
RX   PubMed=23676674; DOI=10.1038/nature12223;
RA   Wu L.-F., Candille S.I., Choi Y., Xie D., Jiang L.-H., Li-Pook-Than J.,
RA   Tang H., Snyder M.P.;
RT   "Variation and genetic control of protein abundance in humans.";
RL   Nature 499:79-82(2013).
//
RX   PubMed=24136357; DOI=10.1126/science.1242379;
RA   Khan Z., Ford M.J., Cusanovich D.A., Mitrano A., Pritchard J.K.,
RA   Gilad Y.;
RT   "Primate transcript and protein expression levels evolve under
RT   compensatory selection pressures.";
RL   Science 342:1100-1104(2013).
//
RX   PubMed=24136359; DOI=10.1126/science.1242429;
RA   McVicker G., van de Geijn B., Degner J.F., Cain C.E., Banovich N.E.,
RA   Raj A., Lewellen N., Myrthil M., Gilad Y., Pritchard J.K.;
RT   "Identification of genetic variants that affect histone modifications
RT   in human cells.";
RL   Science 342:747-749(2013).
//
RX   PubMed=25468404; DOI=10.1186/s13059-014-0547-3;
RA   Zhou X., Cain C.E., Myrthil M., Lewellen N., Michelini K.,
RA   Davenport E.R., Stephens M., Pritchard J.K., Gilad Y.;
RT   "Epigenetic modifications are associated with inter-species gene
RT   expression variation in primates.";
RL   Genome Biol. 15:547.1-547.19(2014).
//