Cellosaurus GM12249 (CVCL_9614)
Cell line name | GM12249 | ||||||||||||||||||||
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Synonyms | CEPH-1416-NA12249; 1416-1187 | ||||||||||||||||||||
Accession | CVCL_9614 | ||||||||||||||||||||
Secondary accession | CVCL_G543 | ||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: GM12249 (RRID:CVCL_9614) | ||||||||||||||||||||
Comments | Part of: CEPH/Utah pedigree cell line collection. Part of: International Genome Sample Resource (1000 genomes project) cell lines. Part of: International Histocompatibility Workshop cell lines. Registration: CEPH Families Reference Panel; 141612. Population: Caucasian; Utah residents with ancestry from Northern and Western Europe. Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV). Omics: CAGE-seq analysis. Omics: H3K27ac ChIP-seq epigenome analysis. Omics: H3K4me1 ChIP-seq epigenome analysis. Omics: H3K4me3 ChIP-seq epigenome analysis. Omics: PU.1 ChIP-seq epigenome analysis. Omics: RPB2 ChIP-seq epigenome analysis. Omics: CNV analysis. Omics: Genome sequenced. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178. Cell type: B-cell; CL=CL_0000236. | ||||||||||||||||||||
Sequence variations |
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HLA typing | Source: IPD-IMGT/HLA=25967
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Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||
Sex of cell | Female | ||||||||||||||||||||
Age at sampling | Adult | ||||||||||||||||||||
Category | Transformed cell line | ||||||||||||||||||||
Web pages | https://www.cephb.fr/en/familles_CEPH.php | ||||||||||||||||||||
Publications | PubMed=17122850; DOI=10.1038/nature05329; PMCID=PMC2669898 PubMed=19043577; DOI=10.1371/journal.pgen.1000287; PMCID=PMC2583954 PubMed=19797678; DOI=10.1101/gr.097600.109; PMCID=PMC2775589 PubMed=20398888; DOI=10.1016/j.ajhg.2010.03.017; PMCID=PMC2869002 PubMed=20856902; DOI=10.1371/journal.pbio.1000480; PMCID=PMC2939022 PubMed=21397061; DOI=10.1016/j.ajhg.2011.02.004; PMCID=PMC3059424 PubMed=24037378; DOI=10.1038/nature12531; PMCID=PMC3918453 PubMed=27617755; DOI=10.1038/srep32406; PMCID=PMC5019111 PubMed=29116076; DOI=10.1038/s41467-017-01467-7; PMCID=PMC5677018 PubMed=31048460; DOI=10.1126/science.aat8266 | ||||||||||||||||||||
Cross-references | |||||||||||||||||||||
Cell line collections (Providers) | Coriell; GM12249 | ||||||||||||||||||||
Cell line databases/resources | CLO; CLO_0019229
dbMHC; 48714 IHW; IHW01174 IPD-IMGT/HLA; 25967 | ||||||||||||||||||||
Biological sample resources | BioSample; SAMN00801317
IGSR; NA12249 | ||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54845633 | ||||||||||||||||||||
Experimental variables resources | EFO; EFO_0001146 | ||||||||||||||||||||
Gene expression databases | ArrayExpress; E-GEUV-1
ArrayExpress; E-GEUV-2 ArrayExpress; E-GEUV-3 ArrayExpress; E-MTAB-3656 ArrayExpress; E-MTAB-3657 ArrayExpress; E-MTAB-5835 GEO; GSM25580 GEO; GSM25581 GEO; GSM112542 GEO; GSM112845 GEO; GSM188820 GEO; GSM273337 GEO; GSM273338 GEO; GSM291666 GEO; GSM291667 GEO; GSM314936 GEO; GSM314937 GEO; GSM420833 GEO; GSM420834 GEO; GSM486815 GEO; GSM486816 GEO; GSM648863 GEO; GSM659986 GEO; GSM660192 GEO; GSM660397 GEO; GSM905876 GEO; GSM905971 GEO; GSM906066 GEO; GSM1719787 | ||||||||||||||||||||
Entry history | |||||||||||||||||||||
Entry creation | 06-Jun-2012 | ||||||||||||||||||||
Last entry update | 30-Jan-2024 | ||||||||||||||||||||
Version number | 30 |