ID   GM06990
AC   CVCL_9587
AS   CVCL_G376
SY   GM06990A; CEPH-1331-NA06990; 1331-8233
DR   CLO; CLO_0036556
DR   EFO; EFO_0002783
DR   BioSample; SAMN00004982
DR   Coriell; GM06990
DR   dbMHC; 48538
DR   ENCODE; ENCBS057ENC
DR   ENCODE; ENCBS058ENC
DR   ENCODE; ENCBS059ENC
DR   ENCODE; ENCBS060ENC
DR   ENCODE; ENCBS061ENC
DR   ENCODE; ENCBS062ENC
DR   ENCODE; ENCBS063ENC
DR   ENCODE; ENCBS064ENC
DR   ENCODE; ENCBS146QHV
DR   ENCODE; ENCBS177AAA
DR   ENCODE; ENCBS185XLT
DR   ENCODE; ENCBS414HDG
DR   ENCODE; ENCBS875KTK
DR   ENCODE; ENCBS987SKT
DR   GEO; GSE38809
DR   GEO; GSM207754
DR   GEO; GSM420468
DR   GEO; GSM472903
DR   GEO; GSM472904
DR   GEO; GSM660029
DR   GEO; GSM660236
DR   GEO; GSM660440
DR   GEO; GSM736558
DR   GEO; GSM736635
DR   GEO; GSM749705
DR   GEO; GSM749708
DR   GEO; GSM749731
DR   GEO; GSM827333
DR   GEO; GSM905817
DR   GEO; GSM905912
DR   GEO; GSM906007
DR   GEO; GSM923443
DR   GEO; GSM931323
DR   GEO; GSM931324
DR   GEO; GSM945179
DR   GEO; GSM945205
DR   GEO; GSM945213
DR   GEO; GSM945237
DR   IHW; IHW01003
DR   IPD-IMGT/HLA; 25804
DR   Wikidata; Q54842431
RX   CelloPub=CLPUB00447;
RX   PubMed=11416159;
RX   PubMed=20215515;
RX   PubMed=20856902;
RX   PubMed=23861383;
WW   https://www.cephb.fr/en/familles_CEPH.php
CC   Part of: CEPH/Utah pedigree cell line collection.
CC   Part of: ENCODE project common cell types; tier 3.
CC   Part of: International Histocompatibility Workshop cell lines.
CC   Registration: CEPH Families Reference Panel; 133102.
CC   HLA typing: A*02:01,24:02; B*51:01,07:02:01; C*15:03,07:02; DPA1*01:03,01:03; DPB1*02:01:02,04:02; DQA1*01:03,03:01; DQB1*03:02,06:03; DRB1*13:01,04:04; DRB3*10:01; DRB4*01 (IPD-IMGT/HLA=25804).
CC   Sequence variation: Mutation; HGNC; 2623; CYP2C9; Simple; p.Arg144Cys (c.430C>T) (416C>T); ClinVar=VCV000008409; Zygosity=Heterozygous; Note=CYP2C9*2 allele (Coriell=GM06990).
CC   Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
CC   Omics: CTCF ChIP-seq epigenome analysis.
CC   Omics: H3K27me3 ChIP-seq epigenome analysis.
CC   Omics: H3K36me3 ChIP-seq epigenome analysis.
CC   Omics: H3K4me3 ChIP-seq epigenome analysis.
CC   Omics: SNP array analysis.
CC   Omics: Transcriptome analysis by microarray.
CC   Omics: Transcriptome analysis by RNAseq.
CC   Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
CC   Cell type: B-cell; CL=CL_0000236.
ST   Source(s): PubMed=11416159
ST   Amelogenin: X
ST   D18S51: 16,17
ST   D21S11: 31,32.2
ST   D8S1179: 14,15
ST   FGA: 19,20
ST   TH01: 6,9.3
ST   vWA: 14,16
OX   NCBI_TaxID=9606; ! Homo sapiens (Human)
SX   Female
AG   41Y
CA   Transformed cell line
DT   Created: 06-06-12; Last updated: 30-01-24; Version: 30
//
RX   CelloPub=CLPUB00447;
RA   Mulivor R.A., Suchy S.F.;
RT   "1992/1993 catalog of cell lines. NIGMS human genetic mutant cell
RT   repository. 16th edition. October 1992.";
RL   (In) Institute for Medical Research (Camden, N.J.) NIH 92-2011; pp.1-918; National Institutes of Health; Bethesda (1992).
//
RX   PubMed=11416159; DOI=10.1073/pnas.121616198;
RA   Masters J.R.W., Thomson J.A., Daly-Burns B., Reid Y.A., Dirks W.G.,
RA   Packer P., Toji L.H., Ohno T., Tanabe H., Arlett C.F., Kelland L.R.,
RA   Harrison M., Virmani A.K., Ward T.H., Ayres K.L., Debenham P.G.;
RT   "Short tandem repeat profiling provides an international reference
RT   standard for human cell lines.";
RL   Proc. Natl. Acad. Sci. U.S.A. 98:8012-8017(2001).
//
RX   PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458;
RA   Rothenberg S.M., Mohapatra G., Rivera M.N., Winokur D., Greninger P.,
RA   Nitta M., Sadow P.M., Sooriyakumar G., Brannigan B.W., Ulman M.J.,
RA   Perera R.M., Wang R., Tam A., Ma X.-J., Erlander M., Sgroi D.C.,
RA   Rocco J.W., Lingen M.W., Cohen E.E.W., Louis D.N., Settleman J.,
RA   Haber D.A.;
RT   "A genome-wide screen for microdeletions reveals disruption of
RT   polarity complex genes in diverse human cancers.";
RL   Cancer Res. 70:2158-2164(2010).
//
RX   PubMed=20856902; DOI=10.1371/journal.pbio.1000480;
RA   Cheung V.G., Nayak R.R., Wang I.X.-R., Elwyn S., Cousins S.M., Morley M.,
RA   Spielman R.S.;
RT   "Polymorphic cis- and trans-regulation of human gene expression.";
RL   PLoS Biol. 8:e1000480.1-e1000480.14(2010).
//
RX   PubMed=23861383; DOI=10.1101/gr.155218.113;
RA   Mesner L.D., Valsakumar V., Cieslik M., Pickin R., Hamlin J.L.,
RA   Bekiranov S.;
RT   "Bubble-seq analysis of the human genome reveals distinct
RT   chromatin-mediated mechanisms for regulating early- and late-firing
RT   origins.";
RL   Genome Res. 23:1774-1788(2013).
//