Cellosaurus GM06985 (CVCL_9586)
Cell line name | GM06985 | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Synonyms | GM06985A; CEPH-1341-NA06985; 1341-8319 | ||||||||||||||||||||||
Accession | CVCL_9586 | ||||||||||||||||||||||
Secondary accession | CVCL_G428 | ||||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: GM06985 (RRID:CVCL_9586) | ||||||||||||||||||||||
Comments | Part of: International Genome Sample Resource (1000 genomes project) cell lines. Part of: CEPH/Utah pedigree cell line collection. Part of: International Histocompatibility Workshop cell lines. Registration: CEPH Families Reference Panel; 134114. Population: Caucasian; Utah residents with ancestry from Northern and Western Europe. Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV). Omics: CAGE-seq analysis. Omics: H3K27ac ChIP-seq epigenome analysis. Omics: H3K4me1 ChIP-seq epigenome analysis. Omics: H3K4me3 ChIP-seq epigenome analysis. Omics: PU.1 ChIP-seq epigenome analysis. Omics: RPB2 ChIP-seq epigenome analysis. Omics: CNV analysis. Omics: Deep proteome analysis. Omics: Genome sequenced. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178. Cell type: B-cell; CL=CL_0000236. | ||||||||||||||||||||||
HLA typing | Source: IPD-IMGT/HLA=25856
| ||||||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||||
Sex of cell | Female | ||||||||||||||||||||||
Age at sampling | 69Y | ||||||||||||||||||||||
Category | Transformed cell line | ||||||||||||||||||||||
Web pages | https://www.cephb.fr/en/familles_CEPH.php http://www.completegenomics.com/documents/PublicGenomes.pdf | ||||||||||||||||||||||
Publications | CLPUB00447 PubMed=17122850; DOI=10.1038/nature05329; PMCID=PMC2669898 PubMed=19797678; DOI=10.1101/gr.097600.109; PMCID=PMC2775589 PubMed=20398888; DOI=10.1016/j.ajhg.2010.03.017; PMCID=PMC2869002 PubMed=20856902; DOI=10.1371/journal.pbio.1000480; PMCID=PMC2939022 PubMed=21397061; DOI=10.1016/j.ajhg.2011.02.004; PMCID=PMC3059424 PubMed=23676674; DOI=10.1038/nature12223; PMCID=PMC3789121 PubMed=24037378; DOI=10.1038/nature12531; PMCID=PMC3918453 PubMed=27617755; DOI=10.1038/srep32406; PMCID=PMC5019111 PubMed=29116076; DOI=10.1038/s41467-017-01467-7; PMCID=PMC5677018 PubMed=31048460; DOI=10.1126/science.aat8266 | ||||||||||||||||||||||
Cross-references | |||||||||||||||||||||||
Cell line collections (Providers) | Coriell; GM06985 | ||||||||||||||||||||||
Cell line databases/resources | CLO; CLO_0036434
dbMHC; 48582 IHW; IHW01058 IPD-IMGT/HLA; 25856 | ||||||||||||||||||||||
Biological sample resources | IGSR; NA06985 | ||||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54842426 | ||||||||||||||||||||||
Experimental variables resources | EFO; EFO_0001107 | ||||||||||||||||||||||
Gene expression databases | ArrayExpress; E-GEUV-1
ArrayExpress; E-GEUV-2 ArrayExpress; E-GEUV-3 ArrayExpress; E-MTAB-3656 ArrayExpress; E-MTAB-3657 ArrayExpress; E-MTAB-5835 GEO; GSM25349 GEO; GSM25350 GEO; GSM112392 GEO; GSM112759 GEO; GSM188687 GEO; GSM273271 GEO; GSM273272 GEO; GSM314819 GEO; GSM314820 GEO; GSM420462 GEO; GSM420463 GEO; GSM424320 GEO; GSM486735 GEO; GSM486736 GEO; GSM648867 GEO; GSM649847 GEO; GSM659969 GEO; GSM660174 GEO; GSM660379 GEO; GSM905816 GEO; GSM905911 GEO; GSM906006 GEO; GSM957356 GEO; GSM1719740 | ||||||||||||||||||||||
Entry history | |||||||||||||||||||||||
Entry creation | 06-Jun-2012 | ||||||||||||||||||||||
Last entry update | 30-Jan-2024 | ||||||||||||||||||||||
Version number | 27 |