Cellosaurus cell line Yamato-SS (CVCL

Cellosaurus Yamato-SS (CVCL_6C44)

Cross-references
Cell line name	Yamato-SS
Synonyms	YAMATO; Yamato
Accession	CVCL_6C44
Resource Identification Initiative	To cite this cell line use: Yamato-SS (RRID:CVCL_6C44)
Comments	Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Population: Japanese. Omics: Deep exome analysis. Omics: Transcriptome analysis by RNAseq. Derived from site: Metastatic; Lung; UBERON=UBERON_0002048.
Sequence variations	Gene fusion; HGNC; HGNC:11340; SS18 + HGNC; HGNC:11335; SSX1; Name(s)=SS18-SSX1 (PubMed=20518020; DepMap=ACH-001277). Mutation; HGNC; HGNC:11998; TP53; Simple; p.Arg273Cys (c.817C>T); ClinVar=VCV000043594; Zygosity=Homozygous (DepMap=ACH-001277).
Disease	Biphasic synovial sarcoma (NCIt: C4279) Synovial sarcoma (ORDO: Orphanet_3273)
Species of origin	Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell	Male
Age at sampling	30Y
Category	Cancer cell line
Publications	PubMed=20518020; DOI=10.1002/stem.452 Naka N., Takenaka S., Araki N., Miwa T., Hashimoto N., Yoshioka K., Joyama S., Hamada K.-i., Tsukamoto Y., Tomita Y., Ueda T., Yoshikawa H., Itoh K. Synovial sarcoma is a stem cell malignancy. Stem Cells 28:1119-1131(2010)
Cell line collections (Providers)	RCB; RCB3577
Cell line databases/resources	cancercelllines; CVCL_6C44 Cell_Model_Passport; SIDM01410 DepMap; ACH-001277
Chemistry resources	PharmacoDB; YAMATO_1678_2019
Encyclopedic resources	Wikidata; Q54995208
Experimental variables resources	EFO; EFO_0022538
Gene expression databases	GEO; GSM2887616 GEO; GSM2887617
Entry history
Entry creation	23-Feb-2016
Last entry update	19-Dec-2024
Version number	19