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Cellosaurus CHLA-90 (CVCL_6610)

[Text version]
Cell line name CHLA-90
Synonyms CH-LA-90; CHLA90
Accession CVCL_6610
Resource Identification Initiative To cite this cell line use: CHLA-90 (RRID:CVCL_6610)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: NCI Pediatric Preclinical Testing Program (PPTP) cell line panel.
Doubling time: 52 hours (PubMed=20922763); 59 hours (COG).
Derived from site: Metastatic; Bone marrow; UBERON=UBERON_0002371.
Sequence variations
  • Mutation; HGNC; 886; ATRX; Unexplicit; Ex2-10del; Zygosity=Hemizygous (PubMed=31631027).
  • Mutation; HGNC; 11998; TP53; Simple; p.Glu286Lys (c.856G>A); ClinVar=VCV000183752; Zygosity=Homozygous (PubMed=11507071; DepMap).
Disease Neuroblastoma (NCIt: C3270)
Neuroblastoma (ORDO: Orphanet_635)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 8Y6M
Category Cancer cell line
STR profile Source(s): COG; PubMed=20922763

Markers:
AmelogeninX
CSF1PO11,12
D2S133818,24
D3S135815,16
D5S81812,13
D7S8209,10
D8S117911
D13S31711,13
D16S53912
D18S5117
D19S43314
D21S1128,30.2
FGA20,22
TH016
TPOX8
vWA18

Run an STR similarity search on this cell line
Web pages https://www.cccells.org/PDF_Files/NB_Cell_Lines/CHLA-90%20Cell%20Line%20Data%20Sheet.pdf
http://www.pptpinvitro.org/cell_lines_panel.php
Publications

PubMed=9850071
Keshelava N., Seeger R.C., Groshen S., Reynolds C.P.
Drug resistance patterns of human neuroblastoma cell lines derived from patients at different phases of therapy.
Cancer Res. 58:5396-5405(1998)

PubMed=11212268
Thompson P.M., Maris J.M., Hogarty M.D., Seeger R.C., Reynolds C.P., Brodeur G.M., White P.S.
Homozygous deletion of CDKN2A (p16INK4a/p14ARF) but not within 1p36 or at other tumor suppressor loci in neuroblastoma.
Cancer Res. 61:679-686(2001)

PubMed=11507071
Keshelava N., Zuo J.J., Chen P., Waidyaratne S.N., Luna M.C., Gomer C.J., Triche T.J., Reynolds C.P.
Loss of p53 function confers high-level multidrug resistance in neuroblastoma cell lines.
Cancer Res. 61:6185-6193(2001)

PubMed=15150091; DOI=10.1158/0008-5472.CAN-03-0809
Schaefer K.-L., Brachwitz K., Wai D.H., Braun Y., Diallo R., Korsching E., Eisenacher M., Voss R., van Valen F., Baer C., Selle B., Spahn L., Liao S.-K., Lee K.A.W., Hogendoorn P.C.W., Reifenberger G., Gabbert H.E., Poremba C.
Expression profiling of t(12;22) positive clear cell sarcoma of soft tissue cell lines reveals characteristic up-regulation of potential new marker genes including ERBB3.
Cancer Res. 64:3395-3405(2004)

PubMed=20922763; DOI=10.1002/pbc.22801
Kang M.H., Smith M.A., Morton C.L., Keshelava N., Houghton P.J., Reynolds C.P.
National Cancer Institute pediatric preclinical testing program: model description for in vitro cytotoxicity testing.
Pediatr. Blood Cancer 56:239-249(2011)

PubMed=24792489; DOI=10.1007/s11060-014-1456-8
Farooqi A.S., Dagg R.A., Choi L.M.R., Shay J.W., Reynolds C.P., Lau L.M.S.
Alternative lengthening of telomeres in neuroblastoma cell lines is associated with a lack of MYCN genomic amplification and with p53 pathway aberrations.
J. Neurooncol. 119:17-26(2014)

PubMed=31631027; DOI=10.1016/j.ccell.2019.09.002
Qadeer Z.A., Valle-Garcia D., Hasson D., Sun Z., Cook A., Nguyen C., Soriano A., Ma A.-Q., Griffiths L.M., Zeineldin M., Filipescu D., Jubierre L., Chowdhury A., Deevy O., Chen X., Finkelstein D.B., Bahrami A., Stewart E., Federico S.M., Gallego S., Dekio F., Fowkes M., Meni D., Maris J.M., Weiss W.A., Roberts S.S., Cheung N.-K.V., Jin J., Segura M.F., Dyer M.A., Bernstein E.
ATRX in-frame fusion neuroblastoma is sensitive to EZH2 inhibition via modulation of neuronal gene signatures.
Cancer Cell 36:512-527.e9(2019)

Cross-references
Cell line databases/resources cancercelllines; CVCL_6610
DepMap; ACH-001481
Anatomy/cell type resources BTO; BTO:0006383
Encyclopedic resources Wikidata; Q54812511
Polymorphism and mutation databases Cosmic; 930045
Cosmic; 1167412
IARC_TP53; 16199
Entry history
Entry creation04-Apr-2012
Last entry update05-Oct-2023
Version number20