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Cellosaurus GM12244 (CVCL_5D29)

[Text version]
Cell line name GM12244
Synonyms CEPH-1416-NA12244; 1416-1191
Accession CVCL_5D29
Secondary accession CVCL_G547
Resource Identification Initiative To cite this cell line use: GM12244 (RRID:CVCL_5D29)
Comments Part of: CEPH/Utah pedigree cell line collection.
Part of: Genetic Testing Reference Material (GeT-RM) samples.
Part of: International Histocompatibility Workshop cell lines.
Registration: CEPH Families Reference Panel; 141607.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Transcriptome analysis by microarray.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Cell type: B-cell; CL=CL_0000236.
HLA typing Source: IPD-IMGT/HLA=25970
Class I
HLA-AA*02:01,23:01
HLA-BB*15:01,41:01
HLA-CC*03:03,17:01
Class II
HLA-DPDPA1*01:03,01:03
DPB1*02:01:02,04:01:01
HLA-DQDQA1*02:01,03:01
DQB1*02:01,03:02:01
HLA-DRDRB1*04:01,07:01

Source: PubMed=29959025
Class I
HLA-AA*02:01:01,23:01:01
HLA-BB*15:01:01,41:01:01
HLA-CC*03:03:01,17:01:01
Class II
HLA-DPDPA1*01:03:01,01:03:01
DPB1*02:01:02,04:01:01
HLA-DQDQA1*02:01:01,03:01:01
DQB1*02:02:01,03:02:01
HLA-DRDRB1*04:01:01,07:01:01
DRB4*01:03:01,01:03:01
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling Age unspecified
Category Transformed cell line
Web pages https://www.cephb.fr/en/familles_CEPH.php
Publications

PubMed=14583597; DOI=10.1152/physiolgenomics.00163.2003
Pastinen T., Sladek R., Gurd S., Sammak A., Ge B., Lepage P., Lavergne K., Villeneuve A., Gaudin T., Brandstrom H., Beck A., Verner A., Kingsley J., Harmsen E., Labuda D., Morgan K., Vohl M.-C., Naumova A.K., Sinnett D., Hudson T.J.
A survey of genetic and epigenetic variation affecting human gene expression.
Physiol. Genomics 16:184-193(2004)

PubMed=20889555; DOI=10.2353/jmoldx.2010.100090; PMCID=PMC2962854
Pratt V.M., Zehnbauer B.A., Wilson J.A., Epstein-Baak R., Babic N., Bettinotti M.P., Buller-Burckle A.M., Butz K.G., Campbell M., Civalier C., El-Badry A., Farkas D.H., Lyon E., Mandal S., McKinney J., Muralidharan K., Noll L., Sander T., Shabbeer J., Smith C.-Y.H., Telatar M., Toji L.H., Vairavan A., Vance C., Weck K.E., Wu A.H.B., Yeo K.-T.J., Zeller M., Kalman L.V.
Characterization of 107 genomic DNA reference materials for CYP2D6, CYP2C19, CYP2C9, VKORC1, and UGT1A1: a GeT-RM and Association for Molecular Pathology collaborative project.
J. Mol. Diagn. 12:835-846(2010)

PubMed=29959025; DOI=10.1016/j.jmoldx.2018.05.009; PMCID=PMC6939753
Bettinotti M.P., Ferriola D., Duke J.L., Mosbruger T.L., Tairis N., Jennings L., Kalman L.V., Monos D.S.
Characterization of 108 genomic DNA reference materials for 11 human leukocyte antigen loci: a GeT-RM collaborative project.
J. Mol. Diagn. 20:703-715(2018)

Cross-references
Cell line collections (Providers) Coriell; GM12244
Cell line databases/resources CLO; CLO_0019224
dbMHC; 48709
IHW; IHW01178
IPD-IMGT/HLA; 25970
Encyclopedic resources Wikidata; Q54845628
Gene expression databases GEO; GSM660031
GEO; GSM660238
GEO; GSM660442
Entry history
Entry creation14-Dec-2015
Last entry update05-Oct-2023
Version number17