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Cellosaurus GM11988 (CVCL_5C50)

[Text version]
Cell line name GM11988
Synonyms CEPH-1362-NA11988; 1362-8567
Accession CVCL_5C50
Secondary accession CVCL_G497
Resource Identification Initiative To cite this cell line use: GM11988 (RRID:CVCL_5C50)
Comments Part of: CEPH/Utah pedigree cell line collection.
Part of: International Histocompatibility Workshop cell lines.
Registration: CEPH Families Reference Panel; 136209.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Cell type: B-cell; CL=CL_0000236.
HLA typing Source: IPD-IMGT/HLA=25925
Class I
HLA-AA*01:01,02:01
HLA-BB*07:02,35:01
HLA-CC*04:01,07:02
Class II
HLA-DPDPA1*01:03,01:03
DPB1*04:02,15:01
HLA-DQDQA1*01:01,03:01
DQB1*03:02:01,05:01:01
HLA-DRDRB1*01:01,04:04
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling Age unspecified
Category Transformed cell line
Web pages https://www.cephb.fr/en/familles_CEPH.php
Publications

PubMed=15514893; DOI=10.1086/426461; PMCID=PMC1182144
Monks S.A., Leonardson A.S., Zhu H., Cundiff P.E., Pietrusiak P., Edwards S., Phillips J.W., Sachs A.B., Schadt E.E.
Genetic inheritance of gene expression in human cell lines.
Am. J. Hum. Genet. 75:1094-1105(2004)

PubMed=20856902; DOI=10.1371/journal.pbio.1000480; PMCID=PMC2939022
Cheung V.G., Nayak R.R., Wang I.X.-R., Elwyn S., Cousins S.M., Morley M., Spielman R.S.
Polymorphic cis- and trans-regulation of human gene expression.
PLoS Biol. 8:e1000480.1-e1000480.14(2010)

PubMed=24924344; DOI=10.1186/1756-0500-7-360; PMCID=PMC4068968
Hariani G.D., Lam E.J., Havener T.M., Kwok P.-Y., McLeod H.L., Wagner M.J., Motsinger-Reif A.A.
Application of next generation sequencing to CEPH cell lines to discover variants associated with FDA approved chemotherapeutics.
BMC Res. Notes 7:360.1-360.10(2014)

Cross-references
Cell line collections (Providers) Coriell; GM11988
Cell line databases/resources CLO; CLO_0020525
dbMHC; 48661
IHW; IHW01128
IPD-IMGT/HLA; 25925
Encyclopedic resources Wikidata; Q54845423
Gene expression databases GEO; GSM25522
GEO; GSM30087
GEO; GSM316228
GEO; GSM316229
GEO; GSM316230
GEO; GSM420721
GEO; GSM957425
Entry history
Entry creation14-Dec-2015
Last entry update05-Oct-2023
Version number16