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Cellosaurus GM11986 (CVCL_5C48)

[Text version]
Cell line name GM11986
Synonyms CEPH-1362-NA11986; 1362-8215
Accession CVCL_5C48
Secondary accession CVCL_G492
Resource Identification Initiative To cite this cell line use: GM11986 (RRID:CVCL_5C48)
Comments Part of: CEPH/Utah pedigree cell line collection.
Part of: International Histocompatibility Workshop cell lines.
Registration: CEPH Families Reference Panel; 136207.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Cell type: B-cell; CL=CL_0000236.
HLA typing Source: IPD-IMGT/HLA=25920
Class I
HLA-AA*01:01,29:02
HLA-BB*07:02,44:03
HLA-CC*07:02,16:01
Class II
HLA-DPDPA1*01:03,01:03
DPB1*02:01:02,15:01
HLA-DQDQA1*01:01,03:01
DQB1*03:02:01,05:01
HLA-DRDRB1*01:01,04:04
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling Age unspecified
Category Transformed cell line
Web pages https://www.cephb.fr/en/familles_CEPH.php
Publications

PubMed=15514893; DOI=10.1086/426461; PMCID=PMC1182144
Monks S.A., Leonardson A.S., Zhu H., Cundiff P.E., Pietrusiak P., Edwards S., Phillips J.W., Sachs A.B., Schadt E.E.
Genetic inheritance of gene expression in human cell lines.
Am. J. Hum. Genet. 75:1094-1105(2004)

PubMed=20856902; DOI=10.1371/journal.pbio.1000480; PMCID=PMC2939022
Cheung V.G., Nayak R.R., Wang I.X.-R., Elwyn S., Cousins S.M., Morley M., Spielman R.S.
Polymorphic cis- and trans-regulation of human gene expression.
PLoS Biol. 8:e1000480.1-e1000480.14(2010)

PubMed=24924344; DOI=10.1186/1756-0500-7-360; PMCID=PMC4068968
Hariani G.D., Lam E.J., Havener T.M., Kwok P.-Y., McLeod H.L., Wagner M.J., Motsinger-Reif A.A.
Application of next generation sequencing to CEPH cell lines to discover variants associated with FDA approved chemotherapeutics.
BMC Res. Notes 7:360.1-360.10(2014)

Cross-references
Cell line collections (Providers) Coriell; GM11986
Cell line databases/resources CLO; CLO_0020523
dbMHC; 48659
IHW; IHW01123
IPD-IMGT/HLA; 25920
Encyclopedic resources Wikidata; Q54845421
Gene expression databases GEO; GSM25520
GEO; GSM30081
GEO; GSM316225
GEO; GSM316226
GEO; GSM316227
GEO; GSM420719
GEO; GSM957423
Entry history
Entry creation14-Dec-2015
Last entry update05-Oct-2023
Version number17