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Cellosaurus GM07038 (CVCL_5B51)

[Text version]
Cell line name GM07038
Synonyms GM07038A; GM07038C; CEPH-1333-NA07038; 1333-8282
Accession CVCL_5B51
Secondary accession CVCL_G418
Resource Identification Initiative To cite this cell line use: GM07038 (RRID:CVCL_5B51)
Comments Part of: CEPH/Utah pedigree cell line collection.
Part of: International Histocompatibility Workshop cell lines.
Registration: CEPH Families Reference Panel; 133301.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Transcriptome analysis by microarray.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Cell type: B-cell; CL=CL_0000236.
Sequence variations
  • Mutation; HGNC; 2623; CYP2C9; Simple; p.Arg144Cys (c.430C>T) (416C>T); ClinVar=VCV000008409; Zygosity=Heterozygous; Note=CYP2C9*2 allele (Coriell=GM07038).
HLA typing Source: IPD-IMGT/HLA=25846
Class I
HLA-AA*03:01:01:01,24:02
HLA-BB*35:01,39:06:01
HLA-CC*04:01,07:02
Class II
HLA-DPDPA1*01:03,01:03
DPB1*03:01:01,16:01
HLA-DQDQA1*01:01,04:01
DQB1*04:02,05:03
HLA-DRDRB1*08:01,14:01
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 41Y
Category Transformed cell line
STR profile Source(s): PubMed=11416159

Markers:
AmelogeninX,Y
D8S117910,13
D18S5113,19
D21S1129,32.2
FGA22,24
TH016,9.3
vWA16,19

Run an STR similarity search on this cell line
Web pages https://www.cephb.fr/en/familles_CEPH.php
Publications

CLPUB00447
Mulivor R.A., Suchy S.F.
1992/1993 catalog of cell lines. NIGMS human genetic mutant cell repository. 16th edition. October 1992.
(In) Institute for Medical Research (Camden, N.J.) NIH 92-2011; pp.1-918; National Institutes of Health; Bethesda (1992)

PubMed=11416159; DOI=10.1073/pnas.121616198
Masters J.R.W., Thomson J.A., Daly-Burns B., Reid Y.A., Dirks W.G., Packer P., Toji L.H., Ohno T., Tanabe H., Arlett C.F., Kelland L.R., Harrison M., Virmani A.K., Ward T.H., Ayres K.L., Debenham P.G.
Short tandem repeat profiling provides an international reference standard for human cell lines.
Proc. Natl. Acad. Sci. U.S.A. 98:8012-8017(2001)

PubMed=20856902; DOI=10.1371/journal.pbio.1000480
Cheung V.G., Nayak R.R., Wang I.X.-R., Elwyn S., Cousins S.M., Morley M., Spielman R.S.
Polymorphic cis- and trans-regulation of human gene expression.
PLoS Biol. 8:e1000480.1-e1000480.14(2010)

Cross-references
Cell line collections (Providers) Coriell; GM07038
Cell line databases/resources CLO; CLO_0036860
dbMHC; 48576
IHW; IHW01046
IPD-IMGT/HLA; 25846
Encyclopedic resources Wikidata; Q54842486
Gene expression databases GEO; GSM25387
GEO; GSM25388
GEO; GSM207755
GEO; GSM316384
GEO; GSM316385
GEO; GSM316386
GEO; GSM420527
GEO; GSM420528
Entry history
Entry creation14-Dec-2015
Last entry update30-Jan-2024
Version number23