Cellosaurus SNU-478 (CVCL_5065)
Cell line name | SNU-478 | ||||||||||||||||||||
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Synonyms | SNU478; NCI-SNU-478 | ||||||||||||||||||||
Accession | CVCL_5065 | ||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: SNU-478 (RRID:CVCL_5065) | ||||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: Seoul National University (SNU) cell line collection. Part of: TCGA-110-CL cell line panel. Population: Korean. Doubling time: 52 hours (PubMed=12107841). Microsatellite instability: Stable (MSS) (PubMed=12107841). Omics: Deep exome analysis. Omics: Deep proteome analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: In situ; Pancreas, ampulla of Vater; UBERON=UBERON_0004913. | ||||||||||||||||||||
Sequence variations | |||||||||||||||||||||
HLA typing | Source: PubMed=26589293
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Genome ancestry | Source: PubMed=30894373
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Disease | Ampulla of Vater adenocarcinoma (NCIt: C6650) Carcinoma of the ampulla of Vater (ORDO: Orphanet_300557) | ||||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||
Sex of cell | Sex unspecified | ||||||||||||||||||||
Age at sampling | Age unspecified | ||||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||||
STR profile | Source(s): KCLB=00478 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||||
Publications | PubMed=12107841; DOI=10.1038/sj.bjc.6600440; PMCID=PMC2376107 PubMed=19956504; DOI=10.4143/crt.2005.37.1.1; PMCID=PMC2785416 PubMed=22460905; DOI=10.1038/nature11003; PMCID=PMC3320027 CLPUB00275 PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878 PubMed=26951071; DOI=10.1186/s12885-016-2193-5; PMCID=PMC4782372 PubMed=27231123; DOI=10.1158/2159-8290.CD-15-1442; PMCID=PMC5458737 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103 PubMed=31395879; DOI=10.1038/s41467-019-11415-2; PMCID=PMC6687785 PubMed=32899426; DOI=10.3390/cancers12092510; PMCID=PMC7565451 | ||||||||||||||||||||
Cross-references | |||||||||||||||||||||
Cell line collections (Providers) | KCLB; 00478 | ||||||||||||||||||||
Cell line databases/resources | cancercelllines; CVCL_5065
Cell_Model_Passport; SIDM00160 DepMap; ACH-000377 | ||||||||||||||||||||
Biological sample resources | BioSample; SAMN10988084 | ||||||||||||||||||||
Chemistry resources | PharmacoDB; SNU478_1466_2019 | ||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54955205 | ||||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-2770
GEO; GSM887631 GEO; GSM888716 | ||||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 738871
Cosmic; 2674053 IARC_TP53; 17160 LiGeA; CCLE_048 Progenetix; CVCL_5065 | ||||||||||||||||||||
Proteomic databases | PRIDE; PXD002657 | ||||||||||||||||||||
Entry history | |||||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||||
Last entry update | 02-May-2024 | ||||||||||||||||||||
Version number | 29 |