Cellosaurus SKN-3 (CVCL_3168)
Cell line name | SKN-3 | ||||||||||||||||||
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Synonyms | SKN3 | ||||||||||||||||||
Accession | CVCL_3168 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: SKN-3 (RRID:CVCL_3168) | ||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Population: Japanese. Characteristics: Established from a xenograft established in nude mice. Doubling time: ~40 hours (Note=Lot 09012008) (JCRB=JCRB1039). Microsatellite instability: Stable (MSS) (Sanger). Omics: CRISPR phenotypic screen. Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. | ||||||||||||||||||
Genome ancestry | Source: PubMed=30894373
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Disease | Oral cavity squamous cell carcinoma (NCIt: C4833) Squamous cell carcinoma of the oral cavity (ORDO: Orphanet_502363) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Sex of cell | Sex unspecified | ||||||||||||||||||
Age at sampling | Age unspecified | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=1299059; JCRB=JCRB1039 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Publications | PubMed=17599052; DOI=10.1038/sj.onc.1210589 PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458; PMCID=PMC2881662 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=30971826; DOI=10.1038/s41586-019-1103-9 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections (Providers) | JCRB; JCRB1039 | ||||||||||||||||||
Cell line databases/resources | CLO; CLO_0009953
cancercelllines; CVCL_3168 Cell_Model_Passport; SIDM00375 CGH-DB; 370-2 Cosmic-CLP; 1299059 DepMap; ACH-002305 LINCS_LDP; LCL-1211 | ||||||||||||||||||
Biological sample resources | BioSample; SAMN03472486 | ||||||||||||||||||
CRISP screens repositories | BioGRID_ORCS_Cell_line; 1016 | ||||||||||||||||||
Chemistry resources | GDSC; 1299059
PharmacoDB; SKN3_1420_2019 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54954755 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-3610
GEO; GSM827179 GEO; GSM1670448 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 1530758
Cosmic; 1530759 Progenetix; CVCL_3168 | ||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 02-May-2024 | ||||||||||||||||||
Version number | 29 |