Cellosaurus YMB-1-E (CVCL_2815)
Cell line name | YMB-1-E | ||||||||||||||||||
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Synonyms | YMB1-E; YMB1E | ||||||||||||||||||
Accession | CVCL_2815 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: YMB-1-E (RRID:CVCL_2815) | ||||||||||||||||||
Comments | Problematic cell line: Contaminated. Parent cell line (YMB-1) has been shown to be a ZR-75-1 derivative (PubMed=23136038). Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Registration: International Cell Line Authentication Committee, Register of Misidentified Cell Lines; ICLAC-00392. Population: Caucasian. Microsatellite instability: Stable (MSS) (Sanger). Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by RNAseq. Derived from site: Metastatic; Ascites; UBERON=UBERON_0007795. | ||||||||||||||||||
Sequence variations |
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HLA typing | Source: PubMed=26589293
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Genome ancestry | Source: PubMed=30894373
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Disease | Invasive breast carcinoma of no special type (NCIt: C4194) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Hierarchy | Parent: CVCL_2814 (YMB-1) | ||||||||||||||||||
Sex of cell | Female | ||||||||||||||||||
Age at sampling | 63Y | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=1303911; JCRB=JCRB0825; TKG=TKG 0440 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Web pages | https://iclac.org/wp-content/uploads/Cross-Contaminations_v13_distribution.xlsx | ||||||||||||||||||
Publications | PubMed=9290701; DOI=10.1002/(SICI)1098-2744(199708)19:4<243::AID-MC5>3.0.CO;2-D PubMed=23136038; DOI=10.1002/ijc.27931 PubMed=25485619; DOI=10.1038/nbt.3080 PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections (Providers) | JCRB; JCRB0825
RCB; RCB1964 - Discontinued TKG; TKG 0440 | ||||||||||||||||||
Cell line databases/resources | cancercelllines; CVCL_2815
Cell_Model_Passport; SIDM01261 Cosmic-CLP; 1303911 DepMap; ACH-002208 | ||||||||||||||||||
Anatomy/cell type resources | BTO; BTO:0002583 | ||||||||||||||||||
Biological sample resources | BioSample; SAMN03152043 | ||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3307353
ChEMBL-Targets; CHEMBL614251 GDSC; 1303911 PharmacoDB; YMB1E_1687_2019 PubChem_Cell_line; CVCL_2815 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54995446 | ||||||||||||||||||
Experimental variables resources | EFO; EFO_0006780 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-2706
GEO; GSM1670587 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 1571791 | ||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000610
EGA; EGAS00001002554 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 02-May-2024 | ||||||||||||||||||
Version number | 34 |