Cellosaurus TE-6 (CVCL_1765)
Cell line name | TE-6 | ||||||||||||||||||
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Synonyms | TE6 | ||||||||||||||||||
Accession | CVCL_1765 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: TE-6 (RRID:CVCL_1765) | ||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Population: Japanese. Microsatellite instability: Stable (MSS) (Sanger). Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: In situ; Esophagus; UBERON=UBERON_0001043. | ||||||||||||||||||
HLA typing | Source: PubMed=26589293
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Genome ancestry | Source: PubMed=30894373
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Disease | Esophageal squamous cell carcinoma (NCIt: C4024) Squamous cell carcinoma of the esophagus (ORDO: Orphanet_99977) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Hierarchy | Children:
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Sex of cell | Male | ||||||||||||||||||
Age at sampling | 71Y | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=946355; RCB=RCB1950; TKG=TKG 0257 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Publications | PubMed=8509434; DOI=10.1007/BF01215923 PubMed=9096669; DOI=10.1002/(SICI)1097-0215(19970328)71:1<79::AID-IJC14>3.0.CO;2-4 PubMed=9290701; DOI=10.1002/(SICI)1098-2744(199708)19:4<243::AID-MC5>3.0.CO;2-D PubMed=15172977; DOI=10.1158/0008-5472.CAN-04-0172 PubMed=17804709; DOI=10.1158/0008-5472.CAN-07-2064 PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113 PubMed=22460905; DOI=10.1038/nature11003; PMCID=PMC3320027 PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103 PubMed=31978347; DOI=10.1016/j.cell.2019.12.023; PMCID=PMC7339254 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections (Providers) | BCRJ; 0372
RCB; RCB1950 TKG; TKG 0257 | ||||||||||||||||||
Cell line databases/resources | CLO; CLO_0051376
cancercelllines; CVCL_1765 Cell_Model_Passport; SIDM00328 CGH-DB; 309-1 CGH-DB; 9259-4 Cosmic-CLP; 946355 DepMap; ACH-000605 LINCS_LDP; LCL-1570 | ||||||||||||||||||
Anatomy/cell type resources | BTO; BTO:0002867 | ||||||||||||||||||
Biological sample resources | BioSample; SAMN03472040
BioSample; SAMN10987703 | ||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3308180
ChEMBL-Targets; CHEMBL2366144 GDSC; 946355 PharmacoDB; TE6_1583_2019 PubChem_Cell_line; CVCL_1765 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54972019 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-2770 ArrayExpress; E-MTAB-3610 GEO; GSM887700 GEO; GSM888793 GEO; GSM1670536 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 735785
Cosmic; 801327 Cosmic; 926102 Cosmic; 946355 Cosmic; 983718 Cosmic; 1123323 Cosmic; 1571758 Cosmic; 2698422 LiGeA; CCLE_742 Progenetix; CVCL_1765 | ||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 02-May-2024 | ||||||||||||||||||
Version number | 37 |