Cellosaurus Panc 05.04 (CVCL_1637)
Cell line name | Panc 05.04 | ||||||||||||||||||||||||||||||||||||
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Synonyms | Panc-05.04; Panc_05_04; Panc05.04; Panc 5.04; Panc5.04; PANC0504; Panc0504; Pa18C; PL-18; PL18 | ||||||||||||||||||||||||||||||||||||
Accession | CVCL_1637 | ||||||||||||||||||||||||||||||||||||
Secondary accession | CVCL_X507 | ||||||||||||||||||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: Panc 05.04 (RRID:CVCL_1637) | ||||||||||||||||||||||||||||||||||||
Comments | Problematic cell line: Partially contaminated. Some stocks of this cell line such as the one used by Sanger cell line project were contaminated with a OCUG-1 derivative as shown by STR profile and SNP fingerprinting analysis (DepMap). Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Part of: MD Anderson Cell Lines Project. Part of: TCGA-110-CL cell line panel. From: Johns Hopkins University School of Medicine; Baltimore; USA. Registration: International Cell Line Authentication Committee, Register of Misidentified Cell Lines; ICLAC-00614. Population: Caucasian. Doubling time: 46.0 hours (PubMed=9612602). Omics: Deep exome analysis. Omics: Deep proteome analysis. Omics: Metabolome analysis. Omics: Protein expression by reverse-phase protein arrays. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: In situ; Pancreas; UBERON=UBERON_0001264. | ||||||||||||||||||||||||||||||||||||
Sequence variations |
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HLA typing | Source: PubMed=26589293
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Genome ancestry | Source: PubMed=30894373
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Disease | Pancreatic ductal adenocarcinoma (NCIt: C9120) | ||||||||||||||||||||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||||||||||||||||||
Sex of cell | Female | ||||||||||||||||||||||||||||||||||||
Age at sampling | 77Y | ||||||||||||||||||||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||||||||||||||||||||
STR profile | Source(s): ATCC=CRL-2557; PubMed=25877200 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||||||||||||||||||||
Web pages | http://dpsc.ccbr.utoronto.ca/cancer/get_cellline.pl?cellline=Panc%2005.04 https://tcpaportal.org/mclp/ https://iclac.org/wp-content/uploads/Cross-Contaminations_v13_distribution.xlsx | ||||||||||||||||||||||||||||||||||||
Publications | PubMed=9612602 PubMed=22460905; DOI=10.1038/nature11003; PMCID=PMC3320027 PubMed=22585861; DOI=10.1158/2159-8290.CD-11-0224; PMCID=PMC5057396 PubMed=22753594; DOI=10.1158/1078-0432.CCR-12-0827; PMCID=PMC3513499 PubMed=25167228; DOI=10.1038/bjc.2014.475; PMCID=PMC4453732 PubMed=25485619; DOI=10.1038/nbt.3080 PubMed=25877200; DOI=10.1038/nature14397 PubMed=26216984; DOI=10.1073/pnas.1501605112; PMCID=PMC4538616 PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878 PubMed=27259358; DOI=10.1074/mcp.M116.058313; PMCID=PMC4974343 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=28196595; DOI=10.1016/j.ccell.2017.01.005; PMCID=PMC5501076 PubMed=29444439; DOI=10.1016/j.celrep.2018.01.051; PMCID=PMC6343826 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103 PubMed=31395879; DOI=10.1038/s41467-019-11415-2; PMCID=PMC6687785 | ||||||||||||||||||||||||||||||||||||
Cross-references | |||||||||||||||||||||||||||||||||||||
Cell line collections (Providers) | ATCC; CRL-2557 | ||||||||||||||||||||||||||||||||||||
Cell line databases/resources | CLO; CLO_0008378
cancercelllines; CVCL_1637 Cell_Model_Passport; SIDM00054 Cell_Model_Passport; SIDM01777 Cosmic-CLP; 1240208 DepMap; ACH-000093 DepMap; ACH-002185 | ||||||||||||||||||||||||||||||||||||
Biological sample resources | BioSample; SAMN03473170
BioSample; SAMN10988160 | ||||||||||||||||||||||||||||||||||||
Chemistry resources | GDSC; 1240208
PharmacoDB; Panc05_04_1243_2019 PharmacoDB; PL18_1271_2019 | ||||||||||||||||||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54937525 | ||||||||||||||||||||||||||||||||||||
Experimental variables resources | EFO; EFO_0006469 | ||||||||||||||||||||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-2706
ArrayExpress; E-MTAB-2770 ArrayExpress; E-MTAB-3610 GEO; GSM206530 GEO; GSM621931 GEO; GSM887498 GEO; GSM888580 GEO; GSM1024409 GEO; GSM1435687 GEO; GSM1435688 GEO; GSM1435689 GEO; GSM1670350 | ||||||||||||||||||||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 1473038
Cosmic; 1509860 Cosmic; 2434083 IARC_TP53; 30143 LiGeA; CCLE_637 Progenetix; CVCL_1637 | ||||||||||||||||||||||||||||||||||||
Proteomic databases | PRIDE; PXD003198 | ||||||||||||||||||||||||||||||||||||
Sequence databases | EGA; EGAS00001000610
EGA; EGAS00001000978 | ||||||||||||||||||||||||||||||||||||
Entry history | |||||||||||||||||||||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||||||||||||||||||||
Last entry update | 02-May-2024 | ||||||||||||||||||||||||||||||||||||
Version number | 35 |