Cellosaurus GT3TKB (CVCL_1237)
Cell line name | GT3TKB | ||||||||||||||||||
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Accession | CVCL_1237 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: GT3TKB (RRID:CVCL_1237) | ||||||||||||||||||
Comments | Problematic cell line: Contaminated. Shown to be a RERF-LC-A1 derivative (PubMed=16643607; PubMed=20143388). Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: JFCR45 cancer cell line panel. Registration: International Cell Line Authentication Committee, Register of Misidentified Cell Lines; ICLAC-00202. Population: Chinese; Taiwan. Microsatellite instability: Stable (MSS) (PubMed=31068700). Microsatellite instability: Instable (MSI-low) (Sanger). Omics: Deep exome analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Misspelling: CT3TKB; Cosmic=1001654. Derived from site: Metastatic; Pleural effusion; UBERON=UBERON_0000175. | ||||||||||||||||||
Sequence variations |
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Genome ancestry | Source: PubMed=30894373
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Disease | Lung squamous cell carcinoma (NCIt: C3493) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Hierarchy | Parent: CVCL_4402 (RERF-LC-A1) | ||||||||||||||||||
Sex of cell | Male | ||||||||||||||||||
Age at sampling | Age unspecified | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=907041 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Web pages | https://iclac.org/wp-content/uploads/Cross-Contaminations_v13_distribution.xlsx | ||||||||||||||||||
Publications | PubMed=15767549; DOI=10.1158/1535-7163.MCT-04-0234 PubMed=16643607; DOI=10.1111/j.1749-0774.2005.00007.x PubMed=20143388; DOI=10.1002/ijc.25242 PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections (Providers) | RCB; RCB0885 - Discontinued | ||||||||||||||||||
Cell line databases/resources | CLO; CLO_0037139
cancercelllines; CVCL_1237 Cell_Model_Passport; SIDM01231 Cosmic-CLP; 907041 - Discontinued DepMap; ACH-002122 LINCS_LDP; LCL-1895 | ||||||||||||||||||
Biological sample resources | BioSample; SAMN03151908 | ||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3308840
ChEMBL-Targets; CHEMBL2366148 PharmacoDB; GT3TKB_417_2019 PubChem_Cell_line; CVCL_1237 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54871832 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-3610 GEO; GSM1669817 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 907041
Cosmic; 983730 Cosmic; 1001654 IARC_TP53; 21351 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 10-Sep-2024 | ||||||||||||||||||
Version number | 38 |