Cellosaurus ETK-1 (CVCL_1206)
Cell line name | ETK-1 | ||||||||||||||||||
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Synonyms | ETK1 | ||||||||||||||||||
Accession | CVCL_1206 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: ETK-1 (RRID:CVCL_1206) | ||||||||||||||||||
Comments | Part of: Biliary tract cancer cell line atlas. Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Population: Japanese. Microsatellite instability: Stable (MSS) (Sanger). Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Caution: Was incorrectly reported to be a SSP-25 contaminated cell line by Riken and thus also by ICLAC but it was later found out that SSP-25 was in fact contaminated by ETK-1 and not the other way around. Derived from site: Metastatic; Ascites; UBERON=UBERON_0007795. | ||||||||||||||||||
Sequence variations |
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Genome ancestry | Source: PubMed=30894373
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Disease | Intrahepatic cholangiocarcinoma (NCIt: C35417) Cholangiocarcinoma (ORDO: Orphanet_70567) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Hierarchy | Children:
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Sex of cell | Female | ||||||||||||||||||
Age at sampling | 61Y | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=906861 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Web pages | https://cell.brc.riken.jp/en/rcb/rbessp-25_announce | ||||||||||||||||||
Publications | PubMed=9252136; DOI=10.1002/hep.510260206 PubMed=10761710; DOI=10.1111/j.1349-7006.2000.tb00935.x; PMCID=PMC5926319 PubMed=16643607; DOI=10.1111/j.1749-0774.2005.00007.x PubMed=20143388; DOI=10.1002/ijc.25242 PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113 CLPUB00275 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=35640676; DOI=10.1016/j.ajpath.2022.05.007; PMCID=PMC9472155 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 PubMed=39026794; DOI=10.1101/2024.07.04.601970; PMCID=PMC11257448 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections (Providers) | RCB; RCB1289 - Discontinued | ||||||||||||||||||
Cell line databases/resources | CLO; CLO_0009831
cancercelllines; CVCL_1206 Cell_Model_Passport; SIDM00276 Cosmic-CLP; 906861 DepMap; ACH-002237 LINCS_LDP; LCL-1789 | ||||||||||||||||||
Biological sample resources | BioSample; SAMN03151925 | ||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3308831
ChEMBL-Targets; CHEMBL2366116 GDSC; 906861 PharmacoDB; ETK1_348_2019 PubChem_Cell_line; CVCL_1206 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54832847 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-3610 GEO; GSM1669779 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 906861
IARC_TP53; 21329 | ||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 19-Dec-2024 | ||||||||||||||||||
Version number | 39 |