Cellosaurus EC-GI-10 (CVCL_1187)
Cell line name | EC-GI-10 | ||||||||||||||||||||||||||
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Synonyms | ECGI10; EC-GI | ||||||||||||||||||||||||||
Accession | CVCL_1187 | ||||||||||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: EC-GI-10 (RRID:CVCL_1187) | ||||||||||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Population: Japanese. Characteristics: Established from a mouse xenograft. Doubling time: ~31 hours (PubMed=2824416). Microsatellite instability: Stable (MSS) (Sanger). Omics: CRISPR phenotypic screen. Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: Metastatic; Lymph node; UBERON=UBERON_0000029. | ||||||||||||||||||||||||||
Sequence variations |
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HLA typing | Source: PubMed=26589293
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Genome ancestry | Source: PubMed=30894373
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Disease | Esophageal squamous cell carcinoma (NCIt: C4024) Squamous cell carcinoma of the esophagus (ORDO: Orphanet_99977) | ||||||||||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||||||||||
Sex of cell | Male | ||||||||||||||||||||||||||
Age at sampling | 65Y | ||||||||||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=753555; PubMed=11416159; RCB=RCB0774 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||||||||||
Publications | PubMed=2824416; DOI=10.20772/cancersci1985.78.10_1044 PubMed=3261732; DOI=10.1210/jcem-67-3-592 PubMed=11416159; DOI=10.1073/pnas.121616198; PMCID=PMC35459 PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113 PubMed=22460905; DOI=10.1038/nature11003; PMCID=PMC3320027 PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=30971826; DOI=10.1038/s41586-019-1103-9 PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 | ||||||||||||||||||||||||||
Cross-references | |||||||||||||||||||||||||||
Cell line collections (Providers) | RCB; RCB0774 | ||||||||||||||||||||||||||
Cell line databases/resources | CLO; CLO_0051378
cancercelllines; CVCL_1187 Cell_Model_Passport; SIDM00278 Cosmic-CLP; 753555 DepMap; ACH-000305 LINCS_LDP; LCL-1151 | ||||||||||||||||||||||||||
Biological sample resources | BioSample; SAMN03472227
BioSample; SAMN10987728 | ||||||||||||||||||||||||||
CRISP screens repositories | BioGRID_ORCS_Cell_line; 862 | ||||||||||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3308289
ChEMBL-Targets; CHEMBL2366240 GDSC; 753555 PharmacoDB; ECGI10_316_2019 PubChem_Cell_line; CVCL_1187 | ||||||||||||||||||||||||||
Encyclopedic resources | Wikidata; Q54831834 | ||||||||||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-2770 ArrayExpress; E-MTAB-3610 GEO; GSM886996 GEO; GSM888065 GEO; GSM1669753 | ||||||||||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 753555
IARC_TP53; 21317 LiGeA; CCLE_378 Progenetix; CVCL_1187 | ||||||||||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||||||||||
Entry history | |||||||||||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||||||||||
Last entry update | 10-Sep-2024 | ||||||||||||||||||||||||||
Version number | 39 |