Cellosaurus Ca9-22 (CVCL_1102)
Cell line name | Ca9-22 | ||||||||||||||||||
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Synonyms | CA9-22; Ca 9-22; CA922; Ca922 | ||||||||||||||||||
Accession | CVCL_1102 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: Ca9-22 (RRID:CVCL_1102) | ||||||||||||||||||
Comments | Problematic cell line: Partially contaminated. Some stocks of Ca9-22 are contaminated with MSK-922 (PubMed=21868764). Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Registration: International Cell Line Authentication Committee, Register of Misidentified Cell Lines; ICLAC-00437. Population: Japanese. Microsatellite instability: Stable (MSS) (Sanger). Omics: Array-based CGH. Omics: CRISPR phenotypic screen. Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: Protein expression by reverse-phase protein arrays. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: In situ; Oral cavity, gingiva; UBERON=UBERON_0001828. | ||||||||||||||||||
Sequence variations |
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HLA typing | Source: PubMed=9023415
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Genome ancestry | Source: PubMed=30894373
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Disease | Gingival squamous cell carcinoma (NCIt: C129857) Squamous cell carcinoma of the oral cavity (ORDO: Orphanet_502363) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Hierarchy | Children:
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Sex of cell | Male | ||||||||||||||||||
Age at sampling | 43Y | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=753538; JCRB=JCRB0625; RCB=RCB1976; TKG=TKG 0485 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Web pages | https://iclac.org/wp-content/uploads/Cross-Contaminations_v13_distribution.xlsx | ||||||||||||||||||
Publications | PubMed=4549822; DOI=10.5794/jjoms.20.100 DOI=10.5794/jjoms.23.619 PubMed=275414; DOI=10.5357/koubyou.45.20 PubMed=2228902; DOI=10.1007/BF02624609 PubMed=1570156 PubMed=9023415; DOI=10.1006/cimm.1996.1062 PubMed=9178645; DOI=10.1006/cimm.1997.1108 PubMed=9247707; DOI=10.1080/15216549700202901 PubMed=9290701; DOI=10.1002/(SICI)1098-2744(199708)19:4<243::AID-MC5>3.0.CO;2-D PubMed=10069537; DOI=10.1111/j.1600-0714.1999.tb02006.x PubMed=10741724 PubMed=12738951; DOI=10.1067/moe.2003.36 PubMed=17052259; DOI=10.1111/j.1349-7006.2006.00343.x; PMCID=PMC11160012 PubMed=17325662; DOI=10.1038/sj.onc.1210330 PubMed=17599052; DOI=10.1038/sj.onc.1210589 PubMed=18097548; DOI=10.3892/ijo.32.1.101 PubMed=18973137; DOI=10.1002/gcc.20626 PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113 PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458; PMCID=PMC2881662 PubMed=21868764; DOI=10.1158/1078-0432.CCR-11-0690; PMCID=PMC3229662 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=29156801; DOI=10.18632/oncotarget.21174; PMCID=PMC5689691 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=30971826; DOI=10.1038/s41586-019-1103-9 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections (Providers) | JCRB; JCRB0625
RCB; RCB1976 TKG; TKG 0485 | ||||||||||||||||||
Cell line databases/resources | CLO; CLO_0051380
cancercelllines; CVCL_1102 Cell_Model_Passport; SIDM00489 CGH-DB; 355-2 Cosmic-CLP; 753538 DepMap; ACH-002043 LINCS_HMS; 50007 LINCS_LDP; LCL-2033 | ||||||||||||||||||
Anatomy/cell type resources | BTO; BTO_0005204 | ||||||||||||||||||
Biological sample resources | BioSample; SAMN01821673 | ||||||||||||||||||
CRISP screens repositories | BioGRID_ORCS_Cell_line; 840 | ||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3308714
ChEMBL-Targets; CHEMBL1075404 GDSC; 753538 PharmacoDB; Ca922_160_2019 PubChem_Cell_line; CVCL_1102 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54808305 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-3610 GEO; GSM301576 GEO; GSM827235 GEO; GSM850380 GEO; GSM1669642 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 753538
Cosmic; 930339 Cosmic; 932155 Cosmic; 1042302 Cosmic; 1046026 Cosmic; 1118791 Cosmic; 1120700 Cosmic; 1123036 Cosmic; 1140783 Cosmic; 1219867 Cosmic; 1317411 Cosmic; 2266786 Cosmic; 2546832 IARC_TP53; 1095 Progenetix; CVCL_1102 | ||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 19-Dec-2024 | ||||||||||||||||||
Version number | 42 |