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Cellosaurus HCC2911 (CVCL_0V16)

[Text version]
Cell line name HCC2911
Synonyms Hamon Cancer Center 2911
Accession CVCL_0V16
Resource Identification Initiative To cite this cell line use: HCC2911 (RRID:CVCL_0V16)
Comments Omics: Deep exome analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis by RNAseq.
Disease Breast carcinoma (NCIt: C4872)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Category Cancer cell line
STR profile Source(s): PubMed=25877200

Markers:
AmelogeninX
CSF1PO8,13
D3S135817,18
D5S81811,12
D7S8208
D8S117912,14
D13S31712,13
D16S53911,13
D18S5115
D21S1130,32.2
FGA21
Penta D9,10
Penta E7
TH016,9.3
TPOX9,12
vWA16,18

Run an STR similarity search on this cell line
Web pages http://www.utsouthwestern.edu/edumedia/edufiles/about_us/admin_offices/technology_development/available_technologies/cell-lines.pdf
Publications

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z.-S., Liu H.-B., Degenhardt J., Mayba O., Gnad F., Liu J.-F., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M.-M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.-M.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

PubMed=25877200; DOI=10.1038/nature14397
Yu M., Selvaraj S.K., Liang-Chu M.M.Y., Aghajani S., Busse M., Yuan J., Lee G., Peale F.V., Klijn C., Bourgon R., Kaminker J.S., Neve R.M.
A resource for cell line authentication, annotation and quality control.
Nature 520:307-311(2015)

Cross-references
Biological sample resources BioSample; SAMN03473200
Chemistry resources PharmacoDB; HCC2911_495_2019
Encyclopedic resources Wikidata; Q54881679
Experimental variables resources EFO; EFO_0006435
Gene expression databases ArrayExpress; E-MTAB-2706
Sequence databases EGA; EGAS00001000610
EGA; EGAS00001002554
Entry history
Entry creation08-Jul-2015
Last entry update05-Oct-2023
Version number11