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Cellosaurus Hs 38.T (CVCL_0735)

[Text version]
Cell line name Hs 38.T
Synonyms Hs38T
Accession CVCL_0735
Resource Identification Initiative To cite this cell line use: Hs 38.T (RRID:CVCL_0735)
Comments Part of: Naval Biosciences Laboratory (NBL) collection (transferred to ATCC in 1982).
Omics: SNP array analysis.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Ovary; UBERON=UBERON_0000992.
HLA typing Source: PubMed=26589293
Class I
HLA-AA*02:05,02:05
HLA-BB*35:08,58:01
HLA-CC*07:01,07:01
Class II
HLA-DQDQA1*03:02,03:02
Disease Ovarian teratoma (NCIt: C8110)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling Age unspecified
Category Cancer cell line
STR profile Source(s): ATCC=CRL-7826; PubMed=25877200

Markers:
AmelogeninX
CSF1PO11
D2S133819
D3S135816
D5S81811
D7S8209
D8S117915
D13S31712
D16S5399
D18S5117
D19S43314
D21S1130
FGA25
Penta D10
Penta E19
TH019
TPOX11
vWA17

Run an STR similarity search on this cell line
Publications

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z.-S., Liu H.-B., Degenhardt J., Mayba O., Gnad F., Liu J.-F., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M.-M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.-M.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

PubMed=25877200; DOI=10.1038/nature14397
Yu M., Selvaraj S.K., Liang-Chu M.M.Y., Aghajani S., Busse M., Yuan J., Lee G., Peale F.V., Klijn C., Bourgon R., Kaminker J.S., Neve R.M.
A resource for cell line authentication, annotation and quality control.
Nature 520:307-311(2015)

PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878
Scholtalbers J., Boegel S., Bukur T., Byl M., Goerges S., Sorn P., Loewer M., Sahin U., Castle J.C.
TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression.
Genome Med. 7:118.1-118.7(2015)

Cross-references
Cell line collections (Providers) ATCC; CRL-7826
Cell line databases/resources CLO; CLO_0003936
Biological sample resources BioSample; SAMN03472520
Chemistry resources PharmacoDB; Hs38_T_575_2019
Encyclopedic resources Wikidata; Q54895616
Experimental variables resources EFO; EFO_0006586
Gene expression databases ArrayExpress; E-MTAB-2706
Sequence databases EGA; EGAS00001000610
Entry history
Entry creation04-Apr-2012
Last entry update02-May-2024
Version number18